Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_O22
         (879 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          61   2e-11
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      61   2e-11
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          50   2e-08
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      50   2e-08

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 60.9 bits (141), Expect = 2e-11
 Identities = 31/94 (32%), Positives = 44/94 (46%)
 Frame = +1

Query: 307 NXXAVXXFLKXXXXGFMPKXXXFSVFYXXXXXXAIALFXLFYYAKXFXXFYXXXCFARVX 486
           N  AV  FL     G +P+   FS++Y        ALF LFY+AK F  F+    +A+  
Sbjct: 75  NAAAVKEFLSIYKHGMLPRGELFSLYYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNN 134

Query: 487 LXXGXFLYAFYXAVIQRSDCHGFVVPASVXXXPY 588
           +    ++Y+ Y AVI R D     +P      PY
Sbjct: 135 INEAQYIYSLYTAVITRPDTKFIQLPPLYEMCPY 168


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 60.9 bits (141), Expect = 2e-11
 Identities = 31/94 (32%), Positives = 44/94 (46%)
 Frame = +1

Query: 307 NXXAVXXFLKXXXXGFMPKXXXFSVFYXXXXXXAIALFXLFYYAKXFXXFYXXXCFARVX 486
           N  AV  FL     G +P+   FS++Y        ALF LFY+AK F  F+    +A+  
Sbjct: 75  NAAAVKEFLSIYKHGMLPRGELFSLYYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNN 134

Query: 487 LXXGXFLYAFYXAVIQRSDCHGFVVPASVXXXPY 588
           +    ++Y+ Y AVI R D     +P      PY
Sbjct: 135 INEAQYIYSLYTAVITRPDTKFIQLPPLYEMCPY 168


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 50.4 bits (115), Expect = 2e-08
 Identities = 28/91 (30%), Positives = 40/91 (43%)
 Frame = +1

Query: 316 AVXXFLKXXXXGFMPKXXXFSVFYXXXXXXAIALFXLFYYAKXFXXFYXXXCFARVXLXX 495
           AV  F++    G +P+   F++        A+ LF L Y AK F  FY    +AR  +  
Sbjct: 76  AVNEFMQLLKHGMLPRGQVFTMMNKEMRHQAVVLFRLLYSAKTFDVFYNTAVWARFNVNE 135

Query: 496 GXFLYAFYXAVIQRSDCHGFVVPASVXXXPY 588
             +LYA   AVI R D     +P      P+
Sbjct: 136 QMYLYALSVAVIHRPDTKLMKLPPMYEVMPH 166


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 50.4 bits (115), Expect = 2e-08
 Identities = 28/91 (30%), Positives = 40/91 (43%)
 Frame = +1

Query: 316 AVXXFLKXXXXGFMPKXXXFSVFYXXXXXXAIALFXLFYYAKXFXXFYXXXCFARVXLXX 495
           AV  F++    G +P+   F++        A+ LF L Y AK F  FY    +AR  +  
Sbjct: 76  AVNEFMQLLKHGMLPRGQVFTMMNKEMRHQAVVLFRLLYSAKTFDVFYNTAVWARFNVNE 135

Query: 496 GXFLYAFYXAVIQRSDCHGFVVPASVXXXPY 588
             +LYA   AVI R D     +P      P+
Sbjct: 136 QMYLYALSVAVIHRPDTKLMKLPPMYEVMPH 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,841
Number of Sequences: 438
Number of extensions: 678
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)