Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_O07
         (916 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome ass...    39   0.011
BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p pro...    39   0.011
AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA...    39   0.011

>U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome
           assembly protein NAP-1 protein.
          Length = 370

 Score = 38.7 bits (86), Expect = 0.011
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +1

Query: 358 EFVDIEAKFYXEVHALECXYEXXYXPLYXKRALIVNGTYXP 480
           + ++IEA+F+ +V+ LE  Y+  Y PL+ KR  I+ G   P
Sbjct: 66  QHLNIEAQFFEDVYKLEQKYQVQYQPLFDKRREIIEGKVDP 106


>BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p
           protein.
          Length = 370

 Score = 38.7 bits (86), Expect = 0.011
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +1

Query: 358 EFVDIEAKFYXEVHALECXYEXXYXPLYXKRALIVNGTYXP 480
           + ++IEA+F+ +V+ LE  Y+  Y PL+ KR  I+ G   P
Sbjct: 66  QHLNIEAQFFEDVYKLEQKYQVQYQPLFDKRREIIEGKVDP 106


>AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA
           protein.
          Length = 370

 Score = 38.7 bits (86), Expect = 0.011
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +1

Query: 358 EFVDIEAKFYXEVHALECXYEXXYXPLYXKRALIVNGTYXP 480
           + ++IEA+F+ +V+ LE  Y+  Y PL+ KR  I+ G   P
Sbjct: 66  QHLNIEAQFFEDVYKLEQKYQVQYQPLFDKRREIIEGKVDP 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,061,679
Number of Sequences: 53049
Number of extensions: 343721
Number of successful extensions: 513
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)