Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_O07
         (916 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical pr...    34   0.16 
AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical...    29   6.1  

>U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical
           protein D2096.8 protein.
          Length = 316

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 364 VDIEAKFYXEVHALECXYEXXYXPLYXKRALIVNGTYXPXXXECXXPM 507
           + IE+ FY  VH LE  +E  +   + +R  IV G   P   +   P+
Sbjct: 41  IQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGEVEPTKEQIDTPI 88


>AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical
           protein Y43F8C.20 protein.
          Length = 193

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -2

Query: 771 RGXGEAXGXXEXXAGXGENWGXXGGG 694
           RG G   G      G G NWG  GGG
Sbjct: 59  RGGGRGGGDWGGNNGGGGNWGGNGGG 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,237,850
Number of Sequences: 27780
Number of extensions: 163001
Number of successful extensions: 237
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)