Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_O02
(918 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.099
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.23
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.9
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 4.9
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 8.6
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.099
Identities = 21/89 (23%), Positives = 25/89 (28%), Gaps = 4/89 (4%)
Frame = +2
Query: 659 RPPXPSSXFPXPXXPXXPXPSXSGXPPIXLXPXXXTPXXPPQXXGSXXDXXXXXPXAPHX 838
+P + P P P P+ SG PP+ P P P P
Sbjct: 1096 KPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
Query: 839 GXXPXTPXXXXRXXPPP----GXPPPXTP 913
P P P P G PP P
Sbjct: 1156 SGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Score = 31.9 bits (69), Expect = 0.13
Identities = 27/97 (27%), Positives = 28/97 (28%), Gaps = 4/97 (4%)
Frame = +2
Query: 635 PXPGXXXFRPPXPSSXFPXPXX----PXXPXPSXSGXPPIXLXPXXXTPXXPPQXXGSXX 802
P P P PS P P P P PS SG PP+ P PP
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPS-SGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Query: 803 DXXXXXPXAPHXGXXPXTPXXXXRXXPPPGXPPPXTP 913
P P P P P G PP P
Sbjct: 1202 KPSVGVPPVPPPSTAPPVP------TPSAGLPPVPVP 1232
Score = 27.9 bits (59), Expect = 2.1
Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
Frame = +2
Query: 665 PXPSSXFPXPXXPXX--PXPSXSGXPPIXLXPXXXTPXXPPQXXGSXXDXXXXXPXAPHX 838
P PSS P P P P+ SG PP+ P P P P P
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIPPVP-KPSVAAPPVPKPSVA--------VPPVPAP 1117
Query: 839 GXXPXTPXXXXRXXP---PPGXPPPXTP 913
P P P P G PP P
Sbjct: 1118 SGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = +3
Query: 693 PXXXXAPXXPXPXPPXSXSXXXXXPPXXPXNXXDXXXTXXXXXXXPHTXAXXPXPXXPFX 872
P AP PP S S PP P + P P P
Sbjct: 364 PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSL 423
Query: 873 GPFPPPXXPPPXP 911
P PP PP P
Sbjct: 424 PPSAPPSLPPSAP 436
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 662 PPXPSSXFPXPXXPXXPXPSXSGXPPIXLXPXXXTPXXPP 781
PP PSS P P P P S P + P PP
Sbjct: 165 PPIPSS-LPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 25.8 bits (54), Expect = 8.6
Identities = 20/78 (25%), Positives = 21/78 (26%), Gaps = 4/78 (5%)
Frame = +2
Query: 692 PXXPXXPXPSXSGXPPIXLXPXXXTPXXPPQXXGSXXDXXXXXPXAPHXGXXPXTPXXXX 871
P P P P PP P P PP S P P P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPP---RPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 872 RXXPP----PGXPPPXTP 913
+ P P PP P
Sbjct: 182 KSPPSAPSLPSAVPPMPP 199
Score = 25.8 bits (54), Expect = 8.6
Identities = 21/81 (25%), Positives = 25/81 (30%), Gaps = 5/81 (6%)
Frame = +2
Query: 662 PPXPSSXF----PXPXXPXXPXPSXSGXPPI-XLXPXXXTPXXPPQXXGSXXDXXXXXPX 826
PP P S P P P PS + PPI P + PP + P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Query: 827 APHXGXXPXTPXXXXRXXPPP 889
P P + PPP
Sbjct: 190 LP-----SAVPPMPPKVPPPP 205
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.6 bits (56), Expect = 4.9
Identities = 20/68 (29%), Positives = 20/68 (29%), Gaps = 6/68 (8%)
Frame = +1
Query: 727 RXPPXPX------PXXXXHPRLXPXXXGIXPXXPXXPXXGPTXRPXPXHPXXXXPXXSPP 888
R PP P P P L P P P P HP P SP
Sbjct: 154 RPPPVPQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPKLQVHPNRLP-HPIHNHPYSSPT 212
Query: 889 RXPPPXXP 912
PPP P
Sbjct: 213 SYPPPLCP 220
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 25.8 bits (54), Expect = 8.6
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = -3
Query: 910 GXGGGXXGGGXGPXXGXXGXGXXAXVWGXWXXXXXVXXXSXXLXGXXGGXXXWXEXDXGG 731
G GG GG GP G G G G G GG + GG
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFG-GGPGG 246
Query: 730 XGXGXXG 710
G G G
Sbjct: 247 FGGGLGG 253
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,114,135
Number of Sequences: 5004
Number of extensions: 9675
Number of successful extensions: 95
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 466510270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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