Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_N24
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical p...    30   1.9  
AL132949-27|CAB61105.1|  209|Caenorhabditis elegans Hypothetical...    29   3.3  
Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z80217-2|CAB02288.1|  209|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical
           protein F49A5.7 protein.
          Length = 411

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +3

Query: 489 STEACSSTLLLPRASTEPTARVS-TCPLLTRSIPTSSLTAMSSVKPL 626
           + EA SST LL   ST  TA +S T   ++RSI   + TA ++++PL
Sbjct: 91  TNEASSSTKLL---STSSTAEISSTTRTVSRSIKPETSTASTTIRPL 134


>AL132949-27|CAB61105.1|  209|Caenorhabditis elegans Hypothetical
           protein Y53F4B.31 protein.
          Length = 209

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/74 (24%), Positives = 34/74 (45%)
 Frame = -2

Query: 565 GQVETLAVGSVEARGSKSVDEXASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELV 386
           GQV  L V   +   S ++    + + F +  ++P E +   ++V+  +DF G F   ++
Sbjct: 51  GQVPYLTVDGFDIPQSAAIIRYLA-NKFGYAGKTPEEQVWADAIVDQFKDFMGSFRERIM 109

Query: 385 GVDEGXSTREXAHL 344
               G S  E A +
Sbjct: 110 AHFAGKSQEEIAKI 123


>Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical
           protein F08H9.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -2

Query: 469 RSPHENIEVLSVVEDSEDFD 410
           R+P+ENI++L   +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600


>Z80217-2|CAB02288.1|  209|Caenorhabditis elegans Hypothetical
           protein F37B1.2 protein.
          Length = 209

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 21/79 (26%), Positives = 32/79 (40%)
 Frame = -2

Query: 580 DLVRSGQVETLAVGSVEARGSKSVDEXASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 401
           D    GQ+  L V   E   S ++    +   F    ++P E   V +VV+  +DF G F
Sbjct: 46  DKTPMGQMPVLNVDGFEIPQSAAITRYLA-RKFGFAGKTPEEEAWVDAVVDQFKDFFGEF 104

Query: 400 HLELVGVDEGXSTREXAHL 344
              ++    G S  E   L
Sbjct: 105 RKLIIAQRAGKSVEEIEKL 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,630,272
Number of Sequences: 27780
Number of extensions: 177860
Number of successful extensions: 360
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)