Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_N23
(870 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1465 + 33794225-33794389,33794471-33794597,33794669-337947... 31 0.91
12_02_1060 - 25752181-25754229 30 2.1
12_02_1057 + 25733376-25735439 30 2.1
12_02_0125 - 13949652-13949822,13949955-13950089,13950309-13950566 30 2.1
07_01_0370 + 2749353-2749786,2749949-2750346,2750435-2750519,275... 30 2.8
06_01_0636 + 4627533-4628546 30 2.8
08_02_1438 + 27108359-27108889 29 3.7
06_03_0572 + 22388682-22389032 29 3.7
11_01_0359 - 2731522-2732346 29 4.8
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111... 29 4.8
10_01_0271 - 2881059-2881409 29 6.4
06_01_0931 + 7192519-7194075 29 6.4
05_04_0398 - 20946852-20947214 29 6.4
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 29 6.4
11_06_0202 - 21184217-21184503,21184622-21184982 28 8.5
10_07_0051 - 12373146-12373517,12375836-12376105,12377560-12377799 28 8.5
07_03_1148 - 24363952-24365086,24365178-24365361,24365438-243654... 28 8.5
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166 28 8.5
02_02_0450 - 10381360-10381391,10381737-10382283,10382770-103829... 28 8.5
>04_04_1465 +
33794225-33794389,33794471-33794597,33794669-33794799,
33795153-33795254,33795337-33795420,33795504-33795731,
33795934-33796038,33796376-33796731,33797146-33797303,
33797399-33797505,33797852-33798061
Length = 590
Score = 31.5 bits (68), Expect = 0.91
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -1
Query: 303 VAVVEVGGP--DGAEHVLVVAGERDLQGGPGGSVRV 202
VA V GGP DGA+ V+ V L G P GS RV
Sbjct: 91 VAYVTTGGPIPDGADAVVQVEDTEQLAGAPDGSKRV 126
>12_02_1060 - 25752181-25754229
Length = 682
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 558 PPSV*TCSPLPPPSVLKLGAL-GMALGEFLIANALALRSWLLL 433
PPS P PPP + +G + G+ +G L + WLLL
Sbjct: 262 PPSPPPAPPAPPPPSVSIGLVAGLTVGAVSFVVVLGVSIWLLL 304
>12_02_1057 + 25733376-25735439
Length = 687
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -1
Query: 561 RPPSV*TCSPLPPPSVLKLGALGMALGEFLIANALALRSWLLL 433
RPPS P PPPSV G +G L + WLLL
Sbjct: 265 RPPSSSPAPPSPPPSVSGGLVAGSTVGAVSFLVVLGVSIWLLL 307
>12_02_0125 - 13949652-13949822,13949955-13950089,13950309-13950566
Length = 187
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 449 LSAKAFAIRNSPSAIPNAPNFNTLGG--GSGLHVQTEGGRIVERGAL*RHQPE*LLG 613
L AK + +SPS +P P+ T G G H + GG V G + RH P G
Sbjct: 128 LKAKLSCV-HSPSELPQVPSRGTRAPHLGDGWHATSAGGMGVPIGCVLRHLPSVFTG 183
>07_01_0370 +
2749353-2749786,2749949-2750346,2750435-2750519,
2751200-2751314,2751538-2751591
Length = 361
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 315 SAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGGSVRVHCEAAGLSP-RTCRH 160
+A L + V + G A V++ AG R GG GG V VH AA SP T RH
Sbjct: 3 AARLASTV-LAGRRRAASVVIAAGPR--YGGGGGGVHVHPWAAFPSPTATTRH 52
>06_01_0636 + 4627533-4628546
Length = 337
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = -1
Query: 423 LTLPATPSCSPKPGMRVPVRLSPCPFTLSRARPCGGSAELVAVVEVGGPDGAEHVLVVAG 244
LTLP +P + VP+ L P T + A P GG+ +A P E + V
Sbjct: 12 LTLPMPQRDAPT-SLAVPLPLPPAATTTTSAPPAGGAMHPLASAGAAPPPPLEELERV-- 68
Query: 243 ERDLQGGPGGSV 208
R + G GG+V
Sbjct: 69 -RRVGSGAGGTV 79
>08_02_1438 + 27108359-27108889
Length = 176
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 321 GGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGGSVRV 202
GG E V VE DGA +L V E+++ GG VRV
Sbjct: 79 GGVREAVRCVEYVDDDGAVLLLTVTTEKEVAVVDGGEVRV 118
>06_03_0572 + 22388682-22389032
Length = 116
Score = 29.5 bits (63), Expect = 3.7
Identities = 26/59 (44%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Frame = -1
Query: 357 PCPFTLSRARPCGGSAEL---VAVVEVGGPDGAEH----VLVVAGERDLQGG-PGGSVR 205
P P L+ A GGS EL V V E GG DGA H + AGE + GG P G R
Sbjct: 3 PSPSILTDA---GGSPELGSGVKVAEDGGGDGAVHGEEDKAITAGEAEGAGGRPKGGAR 58
>11_01_0359 - 2731522-2732346
Length = 274
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -1
Query: 558 PPSV*TCSPLPPPSVLKLGALGMALGEFLIANALALRSWLLL 433
PP P PPP LG+ + FL+ A WLLL
Sbjct: 70 PPHHHPYPPHPPPPTCLRRLLGLVVAAFLLLGAATFIVWLLL 111
>03_01_0141 +
1116833-1117082,1117658-1118574,1119417-1119579,
1119668-1120497,1120562-1120570
Length = 722
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 412 CDAELLPEAGNAGPGQAQPV 353
C A LLPE GN G GQ+ V
Sbjct: 486 CSATLLPEEGNTGDGQSPKV 505
>10_01_0271 - 2881059-2881409
Length = 116
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -1
Query: 351 PFTLSRARPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGGSVRVHCEAAGLSPR 172
P L + C V+E G PD A VL A + GG GGS R +A +PR
Sbjct: 34 PQELHQHHACASWTTKTTVIETGPPDLAVAVLGTARCLAISGG-GGSPRRWLPSATTAPR 92
>06_01_0931 + 7192519-7194075
Length = 518
Score = 28.7 bits (61), Expect = 6.4
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Frame = -1
Query: 576 PRSTMRPPSV*TCSPL---PPPSVLKLGALG-MALGEFLIANALALRSWLLLW-NKLTLP 412
P T + C+ L PP L +L A ++ +ALR+ +L W ++L+LP
Sbjct: 52 PGQTFERACIQACAALAFSPPAVAADLSSLPPSASSPLVLVPNVALRTAILNWCDRLSLP 111
Query: 411 ATPSCSPKPGMRVPVRLSPCP 349
SP V RL P P
Sbjct: 112 YPAPLSPDTARDVVRRLMPSP 132
>05_04_0398 - 20946852-20947214
Length = 120
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 487 RHSQRAQLQHAGRREWTTCSNRRWAHR*ARR 579
R QR Q AG T CS+RRW RR
Sbjct: 63 RRKQRPPAQLAGMEIGTACSSRRWPQLLTRR 93
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 28.7 bits (61), Expect = 6.4
Identities = 27/73 (36%), Positives = 33/73 (45%)
Frame = -1
Query: 417 LPATPSCSPKPGMRVPVRLSPCPFTLSRARPCGGSAELVAVVEVGGPDGAEHVLVVAGER 238
LP +P + VP RL P PF LS + P G + LVA A V AG
Sbjct: 5 LPHSPRAAAA-APSVPSRL-PRPFLLSLSSPSRGGSGLVA---------ASASAVAAGGS 53
Query: 237 DLQGGPGGSVRVH 199
+ GG GGS +H
Sbjct: 54 EGDGGIGGSHGLH 66
>11_06_0202 - 21184217-21184503,21184622-21184982
Length = 215
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -1
Query: 579 APRSTMRPPSV*TCSPL--PPPSVLKLGALGMALGEFLIANALALRSWLLL 433
AP+ + PP + SPL PPP GA G +G +A A+A+ + L L
Sbjct: 164 APKPSSPPPFT-SPSPLPPPPPPPTSHGARGATMGIGTVAAAVAMTTLLAL 213
>10_07_0051 - 12373146-12373517,12375836-12376105,12377560-12377799
Length = 293
Score = 28.3 bits (60), Expect = 8.5
Identities = 30/86 (34%), Positives = 34/86 (39%)
Frame = -1
Query: 531 LPPPSVLKLGALGMALGEFLIANALALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPC 352
LPPPS L G LG + +R +TPS G+ R P
Sbjct: 210 LPPPSSLTPSTAG-ELGNHRRCQSSPIRGGRAQEMPTLSSSTPSTVG--GLGSHCRHRPY 266
Query: 351 PFTLSRARPCGGSAELVAVVEVGGPD 274
P RAR S LVAVVE GG D
Sbjct: 267 PIRSGRARS-PPSMSLVAVVEDGGRD 291
>07_03_1148 -
24363952-24365086,24365178-24365361,24365438-24365474,
24365585-24365818
Length = 529
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -1
Query: 333 ARPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGGSV 208
A PCGG E + +GG D V+++ GE L GPGG +
Sbjct: 452 AAPCGGRREEYHLSPLGG-DIRSQVVLLNGEA-LALGPGGEI 491
>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
Length = 545
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 213 SVRVHCEAAGLSPRTCRHVST 151
S+R+HC A L+PR CR T
Sbjct: 401 SLRLHCPAPLLAPRKCRETCT 421
>02_02_0450 -
10381360-10381391,10381737-10382283,10382770-10382952,
10383123-10383863
Length = 500
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -1
Query: 534 PLPPPSVLKLGALGMALGEFLIANALALRSWLL---LWNKLTLPATPSCSPKPGMRV 373
P PPPS++ L +L +I++ +L WL LW L L P+ K MR+
Sbjct: 302 PWPPPSLVSLTSLASKESNLVISDPESLSVWLSSIDLWGML-LNYYPTIVEKWNMRI 357
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,050,937
Number of Sequences: 37544
Number of extensions: 472595
Number of successful extensions: 1772
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1770
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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