Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_N17
         (867 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          68   1e-13
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      68   1e-13
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          55   7e-10
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      55   7e-10
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          31   0.010
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      31   0.010

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 67.7 bits (158), Expect = 1e-13
 Identities = 36/104 (34%), Positives = 48/104 (46%)
 Frame = +3

Query: 285 YXNXXAVXXFLKXYXXGFXPXXLXFSVFYXXXXXXAXALFXLFYYAXXFXTFYXXACFAR 464
           Y N  AV  FL  Y  G  P    FS++Y        ALF LFY+A  F  F+  A +A+
Sbjct: 73  YTNAAAVKEFLSIYKHGMLPRGELFSLYYPQLLREMSALFKLFYHAKDFDIFFKTALWAK 132

Query: 465 VXLXXGXFLYAFYXAVIXRSDCHGFVVPAPYXVXPKMFMXMXVL 596
             +    ++Y+ Y AVI R D     +P  Y + P  F    VL
Sbjct: 133 NNINEAQYIYSLYTAVITRPDTKFIQLPPLYEMCPYFFFNSEVL 176



 Score = 30.7 bits (66), Expect = 0.018
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 736 RLXXFXEXXGMXAYYXYFHSXLPFWWXSXKY 828
           +L  F E  G+  YY +     PFW  S +Y
Sbjct: 219 KLNYFIEDIGLNTYYFFLRQAFPFWLPSKEY 249


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 67.7 bits (158), Expect = 1e-13
 Identities = 36/104 (34%), Positives = 48/104 (46%)
 Frame = +3

Query: 285 YXNXXAVXXFLKXYXXGFXPXXLXFSVFYXXXXXXAXALFXLFYYAXXFXTFYXXACFAR 464
           Y N  AV  FL  Y  G  P    FS++Y        ALF LFY+A  F  F+  A +A+
Sbjct: 73  YTNAAAVKEFLSIYKHGMLPRGELFSLYYPQLLREMSALFKLFYHAKDFDIFFKTALWAK 132

Query: 465 VXLXXGXFLYAFYXAVIXRSDCHGFVVPAPYXVXPKMFMXMXVL 596
             +    ++Y+ Y AVI R D     +P  Y + P  F    VL
Sbjct: 133 NNINEAQYIYSLYTAVITRPDTKFIQLPPLYEMCPYFFFNSEVL 176



 Score = 30.7 bits (66), Expect = 0.018
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 736 RLXXFXEXXGMXAYYXYFHSXLPFWWXSXKY 828
           +L  F E  G+  YY +     PFW  S +Y
Sbjct: 219 KLIYFIEDIGLNTYYFFLRQAFPFWLPSKEY 249


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 55.2 bits (127), Expect = 7e-10
 Identities = 33/108 (30%), Positives = 45/108 (41%)
 Frame = +3

Query: 285 YXNXXAVXXFLKXYXXGFXPXXLXFSVFYXXXXXXAXALFXLFYYAXXFXTFYXXACFAR 464
           Y +  AV  F++    G  P    F++        A  LF L Y A  F  FY  A +AR
Sbjct: 71  YNDKEAVNEFMQLLKHGMLPRGQVFTMMNKEMRHQAVVLFRLLYSAKTFDVFYNTAVWAR 130

Query: 465 VXLXXGXFLYAFYXAVIXRSDCHGFVVPAPYXVXPKMFMXMXVLXXXY 608
             +    +LYA   AVI R D     +P  Y V P ++    V+   Y
Sbjct: 131 FNVNEQMYLYALSVAVIHRPDTKLMKLPPMYEVMPHLYFNDEVMQKAY 178


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 55.2 bits (127), Expect = 7e-10
 Identities = 33/108 (30%), Positives = 45/108 (41%)
 Frame = +3

Query: 285 YXNXXAVXXFLKXYXXGFXPXXLXFSVFYXXXXXXAXALFXLFYYAXXFXTFYXXACFAR 464
           Y +  AV  F++    G  P    F++        A  LF L Y A  F  FY  A +AR
Sbjct: 71  YNDKEAVNEFMQLLKHGMLPRGQVFTMMNKEMRHQAVVLFRLLYSAKTFDVFYNTAVWAR 130

Query: 465 VXLXXGXFLYAFYXAVIXRSDCHGFVVPAPYXVXPKMFMXMXVLXXXY 608
             +    +LYA   AVI R D     +P  Y V P ++    V+   Y
Sbjct: 131 FNVNEQMYLYALSVAVIHRPDTKLMKLPPMYEVMPHLYFNDEVMQKAY 178


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 31.5 bits (68), Expect = 0.010
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 736 RLXXFXEXXGMXAYYXYFHSXLPFWWXSXKY 828
           +L  F E   + AYY Y    LP+W  S +Y
Sbjct: 220 KLDYFMEDVELNAYYYYMREMLPYWMSSSQY 250


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 31.5 bits (68), Expect = 0.010
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 736 RLXXFXEXXGMXAYYXYFHSXLPFWWXSXKY 828
           +L  F E   + AYY Y    LP+W  S +Y
Sbjct: 220 KLDYFMEDVELNAYYYYMREMLPYWMSSSQY 250


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,930
Number of Sequences: 438
Number of extensions: 742
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)