Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_N10
(860 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 115 1e-26
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 107 2e-24
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 101 2e-22
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 100 3e-22
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 97 3e-21
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 61 2e-10
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 53 5e-08
SPCC1753.05 |rsm1||RNA export factor Rsm1|Schizosaccharomyces po... 32 0.12
SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7 |Schizos... 31 0.28
SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyc... 29 1.1
SPBP26C9.03c |||iron ion transporter |Schizosaccharomyces pombe|... 27 4.5
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 115 bits (276), Expect = 1e-26
Identities = 73/220 (33%), Positives = 114/220 (51%), Gaps = 2/220 (0%)
Frame = +2
Query: 206 LYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTR 385
LYI+G++ S T W E +P+ EVI +V A + E+ A+ +AK A+KTW K +
Sbjct: 23 LYINGEWHKSAET-W-ETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAFKTWKKVPGSEK 80
Query: 386 QQLMFKFARLLRENQSKLAAKITEEQGKT-IADAEGDVLRGIQSVEHCCSITSLQLGDSI 562
+L+ K A L ++ LAA + GK +++A GDV I + +C G I
Sbjct: 81 GELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYGQVI 140
Query: 563 QNIAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMXPPALVTGNTCIIKPSEQDPGATLM 742
+ + ++ + P+GV G + +N+P+ + W PAL GN IIK +E P + L
Sbjct: 141 PTGPEKL-AYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLSLLY 199
Query: 743 MMELXQEAGAPRXVVNIIHGTHG-AVXFICDQPEIKAVSF 859
L +EAG P+ VVNII G A ++ P I ++F
Sbjct: 200 FATLVEEAGFPKGVVNIISGLGTVAGSYMAKHPGIDKIAF 239
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 107 bits (257), Expect = 2e-24
Identities = 65/220 (29%), Positives = 110/220 (50%), Gaps = 3/220 (1%)
Frame = +2
Query: 209 YIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQ 388
++ G+++ S E+ NPAT E+IG+V + + +E A+ AA A+KT+ T + R
Sbjct: 21 FVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAFKTYKNFTHVQRS 80
Query: 389 QLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITSLQLGDSIQN 568
QL+ ++A L+ EN+ L +T E GK ++ AE +V ++ + GD +
Sbjct: 81 QLLERWAELIMENKDDLVKMLTLENGKPLSQAEMEVTTCSGYLKWYAAEAVRTFGDVAPS 140
Query: 569 IAKDMD-THSYKVPLGVVGGVAAFNFPVMIPLWMXPPALVTGNTCIIKPSEQDPGATLMM 745
+ + S K P+GV + +NFP + AL G T I P+ + P L +
Sbjct: 141 SLQSQNFLISIKQPVGVSALITPWNFPAAMIARKGGAALAAGCTAIFLPAFRTPYVCLGL 200
Query: 746 MELXQEAGAPRXVVNIIHGTHGAV--XFICDQPEIKAVSF 859
+ L QEAG P V+N+I + + + P ++ VSF
Sbjct: 201 VRLAQEAGFPDGVLNVITSSDASAHGKELTTNPIVRKVSF 240
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 101 bits (241), Expect = 2e-22
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 4/221 (1%)
Frame = +2
Query: 209 YIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQ 388
YI G++V + + ++ NP NE + V + + +E A+ A A+ ++ S + R
Sbjct: 27 YIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAFLSYRNSDIKERY 86
Query: 389 QLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITSLQLGDSIQN 568
++ ++ L+ EN LA +T E GK + DA+G+V+ + ++ GDS +
Sbjct: 87 AILRRWYDLIMENADDLATMMTLENGKALGDAKGEVVYAAKFIDWFAGEALRISGDSSMS 146
Query: 569 IAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMXPPALVTGNTCIIKPSEQDPGATLMMM 748
+ K P+GVVG + +NFP + AL G T +I+P+ + P L +
Sbjct: 147 SNPQNRIITIKQPVGVVGIITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFTALALA 206
Query: 749 ELXQEAGAPRXVVNIIHGT----HGAVXFICDQPEIKAVSF 859
+L + AG P V+N++ HG + P I+ VSF
Sbjct: 207 KLAERAGVPAGVLNMVTANSPSEHGIE--LTTNPLIRKVSF 245
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 100 bits (239), Expect = 3e-22
Identities = 57/202 (28%), Positives = 104/202 (51%), Gaps = 3/202 (1%)
Frame = +2
Query: 206 LYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKT---WSKSTV 376
L+I+ Q+VDS +++ +P+T ++I V +A ++++ A+ A+ A++T W K +
Sbjct: 25 LFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTDAPWRKFSS 84
Query: 377 LTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITSLQLGD 556
R + + + A + +N LA+ T + GK+I A GDV + G
Sbjct: 85 AQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFRYYGGWADKDYGQ 144
Query: 557 SIQNIAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMXPPALVTGNTCIIKPSEQDPGAT 736
+I+ K ++ P+GV G + +NFP ++ W PA+ GNT I+K +E P +
Sbjct: 145 TIETDIKRF-AYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELTPLSA 203
Query: 737 LMMMELXQEAGAPRXVVNIIHG 802
L + + E G P V+N++ G
Sbjct: 204 LCLTKFVPECGFPPGVINVLSG 225
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 97.1 bits (231), Expect = 3e-21
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 6/211 (2%)
Frame = +2
Query: 191 APTTKLYIDGQYVD--SRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKT-- 358
AP L+IDG++V I L NPAT E+IG A+ ++ SA++ A +++
Sbjct: 18 APENSLFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTFRSGI 77
Query: 359 WSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSIT 538
W+K R ++ K A+++RE + LA T GK A D+ E+ +
Sbjct: 78 WAKWPGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAEVA 137
Query: 539 SLQLGDSIQNIAKDMDTHSY--KVPLGVVGGVAAFNFPVMIPLWMXPPALVTGNTCIIKP 712
+ + ++ + P GV+G + +NFP+ + LW PA+ +GN ++KP
Sbjct: 138 ETDNPTVKVPLPNNPGFCAFEKRFPRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKP 197
Query: 713 SEQDPGATLMMMELXQEAGAPRXVVNIIHGT 805
SE P + L + +EAG P V+N+I G+
Sbjct: 198 SELAPWSCLEFALICKEAGLPDGVLNVIIGS 228
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 61.3 bits (142), Expect = 2e-10
Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 7/228 (3%)
Frame = +2
Query: 197 TTKLYIDGQYVDSRTTNWIELTNPATNE-VIGRVPEATQDELTSALDAAKRAYKTWSKST 373
T + IDG+ V++ T E P ++ V+ R A + A++AA R K W
Sbjct: 44 TIPVIIDGKEVETNTIG--EQRCPFEHKKVVARYHRAGAKHVEDAIEAALRGKKVWESLP 101
Query: 374 VLTRQQLMFKFARLLREN-QSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITS--- 541
R + K A L+ + KL A QGK I AE D G++ ++ T
Sbjct: 102 FADRSAIFLKAAHLISTKYRYKLMAATMIGQGKNIWQAEIDA--GMEIIDFLRFNTKYAS 159
Query: 542 -LQLGDSIQNIAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMXPPALVTGNTCIIKPSE 718
L +N + Y+ G V + FNF + P L+ GN ++KPS+
Sbjct: 160 ELYASQPPENTPGVWNRMEYRPLEGFVYAITPFNFTAIAGNLAAAPLLM-GNVVLMKPSD 218
Query: 719 QDPGATLMMMELXQEAGAPRXVVNIIHGTHGAVXFIC-DQPEIKAVSF 859
++ ++ ++ +EAG P + I G V +C + PE + F
Sbjct: 219 HAVLSSYIVYQIFREAGLPAGALQFIPGDAVEVSKVCFNHPEFAGLHF 266
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 53.2 bits (122), Expect = 5e-08
Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 8/206 (3%)
Frame = +2
Query: 266 PATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAA 445
P ++G V + ++ ++ A+ A K W ++ R+ + + NQ K A
Sbjct: 10 PGDGSLLGEVKLFNKSDIDQSIILAEEAQKEWKSTSFAERRNFLKALKENIIRNQDKYAE 69
Query: 446 KITEEQGKTIADAE-GDVLRGIQSVEHCCS--ITSLQLGDSIQNIAKDMDTHSYKV-PLG 613
++ GKT+ DA G++L ++ + + SL+ ++ K PLG
Sbjct: 70 IACKDTGKTLVDAAFGEILVTLEKINWTLANGEQSLRPTKRPNSLLTSYKGGYVKYEPLG 129
Query: 614 VVGGVAAFNFPVMIPLWMXPPALVTGNTCIIKPSEQDPGAT----LMMMELXQEAGAPRX 781
V+ + ++N+P+ L AL GN ++K SE +T M+ L Q G
Sbjct: 130 VIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQSMGHSPE 189
Query: 782 VVNIIHGTHGAVXFICDQPEIKAVSF 859
+V I + IK ++F
Sbjct: 190 LVQCITCLPDVADHLTSHSGIKHITF 215
>SPCC1753.05 |rsm1||RNA export factor Rsm1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 296
Score = 31.9 bits (69), Expect = 0.12
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +2
Query: 260 TNPATNEVIG---RVPEATQDELTSALDAAKRAYKTWSKSTVLTR 385
T+ TNE++ ++ E +D L +L A+K YK WS+ L R
Sbjct: 5 TDMETNEILDQLDKIDERNEDILLKSLKASKCTYKPWSREEFLRR 49
>SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 721
Score = 30.7 bits (66), Expect = 0.28
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 224 YVDSRTTNWIELTNPATNEVIGRV-PEATQDELTSALDAAKRAY 352
Y +RT W+EL NPA EV G + E + E T+++ A RA+
Sbjct: 498 YEPARTGEWMELLNPA--EVFGNIMVEYSYPECTTSVILALRAF 539
>SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 529
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 599 KVPLGVVGGVAAFNFPVMIPLWMXPPALVTGNTCI 703
K +GVVGG +P P+ P ++TGN +
Sbjct: 291 KGQVGVVGGYPVMGYPPPSPVLQKPDLIMTGNRTV 325
>SPBP26C9.03c |||iron ion transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 584
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 11 YRLTIGNSLRF*ISWLCPLP 70
Y+ T G SL I WLC LP
Sbjct: 480 YKSTFGGSLSQWIGWLCALP 499
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,331,353
Number of Sequences: 5004
Number of extensions: 66074
Number of successful extensions: 153
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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