Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_N09
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0762 - 5852168-5852266,5852409-5852569,5852691-5852823          162   4e-40
02_03_0219 + 16541350-16541482,16541605-16541765,16541863-165419...   151   7e-37
02_02_0303 - 8766264-8766362,8767112-8767272,8768160-8768289          101   1e-21
01_01_0365 - 2859617-2859722,2860047-2860489,2862232-2862391,286...    40   0.002

>07_01_0762 - 5852168-5852266,5852409-5852569,5852691-5852823
          Length = 130

 Score =  162 bits (393), Expect = 4e-40
 Identities = 74/98 (75%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
 Frame = +2

Query: 206 VIVKFLTVXXXHGYIGXFEIVDDHRAGKXVVNLTGRLNKCGVISPRFDVPINDIERWT-N 382
           VI+KFL V   HGYIG FE VDDHR+GK VV L GRLNKCGVISPRFDV + +IE WT  
Sbjct: 33  VIIKFLIVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIESWTAR 92

Query: 383 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 496
           LLPSRQFGY+VLTTS GIMDHEEARRK++GGK+LGFF+
Sbjct: 93  LLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130



 Score = 37.9 bits (84), Expect = 0.011
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +1

Query: 112 VRLHVLXXALKSLHXAEKRGXSQVLIRP 195
           VR+ VL  ALK+++ AEKRG  QVLIRP
Sbjct: 2   VRVSVLNDALKTMYNAEKRGKRQVLIRP 29


>02_03_0219 +
           16541350-16541482,16541605-16541765,16541863-16541940,
           16543176-16543445
          Length = 213

 Score =  151 bits (366), Expect = 7e-37
 Identities = 71/94 (75%), Positives = 78/94 (82%), Gaps = 1/94 (1%)
 Frame = +2

Query: 206 VIVKFLTVXXXHGYIGXFEIVDDHRAGKXVVNLTGRLNKCGVISPRFDVPINDIERWT-N 382
           VI+KFL V   HGYIG FE VDDHR+GK VV L GRLNKCGVISPRFDV + +IE WT  
Sbjct: 33  VIIKFLIVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIESWTAR 92

Query: 383 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 484
           LLPSRQFGY+VLTTS GIMDHEEARRK++GGK L
Sbjct: 93  LLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKEL 126



 Score = 37.1 bits (82), Expect = 0.019
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +1

Query: 112 VRLHVLXXALKSLHXAEKRGXSQVLIRP 195
           VR+ VL  ALK+++ AEKRG  QV+IRP
Sbjct: 2   VRVSVLNDALKTMYNAEKRGKRQVMIRP 29


>02_02_0303 - 8766264-8766362,8767112-8767272,8768160-8768289
          Length = 129

 Score =  101 bits (241), Expect = 1e-21
 Identities = 43/97 (44%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
 Frame = +2

Query: 206 VIVKFLTVXXXHGYIGXFEIVDDHRAGKXVVNLTGRLNKCGVISPRFDVPINDIERW-TN 382
           V+V FL +    GYI  FE++D HR GK  V L GR+  C  ++ R D+   +IE++   
Sbjct: 32  VMVSFLNIMKHRGYIKKFEVIDPHRVGKINVELHGRIKDCKALTYRQDIRAKEIEQYRVR 91

Query: 383 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFF 493
           +LP+RQ+GY+V+TT  G++DHEEA ++++GG++LG+F
Sbjct: 92  MLPTRQWGYVVITTPNGVLDHEEAIKQNVGGQVLGYF 128


>01_01_0365 - 2859617-2859722,2860047-2860489,2862232-2862391,
            2863431-2863516,2863648-2866272
          Length = 1139

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +2

Query: 266  VDDHRAGKXVVNLTGRLNKCGVISPRFDVPINDI 367
            VDDH++G+ ++   GRLNK GVIS R DV +  +
Sbjct: 912  VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,513,844
Number of Sequences: 37544
Number of extensions: 165657
Number of successful extensions: 278
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)