Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_N07
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0850 + 21050164-21050189,21050874-21050979,21051186-210512...    30   2.1  
02_03_0254 + 16910070-16910173,16910266-16910410                       29   3.7  

>10_08_0850 + 21050164-21050189,21050874-21050979,21051186-21051257,
            21051775-21051828,21052077-21052184,21052653-21052802,
            21052914-21053258,21053361-21054801,21054844-21055675,
            21057060-21057325,21057530-21059603,21060172-21060442,
            21060556-21060990
          Length = 2059

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +2

Query: 548  SVRQRKERGCSNIPDSGITRNWCRTHRCQST*LEPFHCIRECGGFHQSHIQFDIRRV-VG 724
            ++R+R +     +P S ++   C      S  L PF C     G HQ   QF +  +   
Sbjct: 1926 TIRRRIQVAMPILPTSRLSSITCGPPLLSSAALSPFQCSTSAAGPHQ---QFPLNWIPTN 1982

Query: 725  VSERCLQSCPS 757
            +S RC  + PS
Sbjct: 1983 LSRRCKAALPS 1993


>02_03_0254 + 16910070-16910173,16910266-16910410
          Length = 82

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +2

Query: 527 SGWKILQSVRQRKERGCSNI--PDSGITRNWCRT 622
           +GW +  +VR    R C  +   DSGI   WCR+
Sbjct: 11  AGWCVDSNVRTDGGRSCDTVWTADSGIDGRWCRS 44


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,626,770
Number of Sequences: 37544
Number of extensions: 380530
Number of successful extensions: 797
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)