Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_N05
         (1037 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0307 + 16185405-16185713,16185847-16185942,16186626-161867...    29   6.1  
02_01_0302 - 2021221-2023305                                           29   8.0  

>11_04_0307 +
           16185405-16185713,16185847-16185942,16186626-16186730,
           16186938-16187090,16188395-16188478,16188566-16188694,
           16188986-16189165,16189555-16189677,16189678-16189794,
           16189889-16190053
          Length = 486

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = +3

Query: 618 SXXXPSSCXSHPXXXPXPXGXXSSPPXTHXPXXPP 722
           S   PSS    P   P P G   SPP    P  PP
Sbjct: 19  SAPPPSSSSPSPPVPPDPYGADLSPPPPPPPKPPP 53


>02_01_0302 - 2021221-2023305
          Length = 694

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 22/83 (26%), Positives = 23/83 (27%), Gaps = 2/83 (2%)
 Frame = +3

Query: 480 FLYPPGKMXVPPXXLPLXXQPQXXIXXXXQCSXPQX--PSXXHPRNXGSXXXPSSCXSHP 653
           F  PPG     P   P    P          S      P   H    G+        SHP
Sbjct: 565 FAPPPGSYGPIPSTPPSSGSPPSPSSGYQPPSGQPGASPPTQHVPGAGTPTTTPPSHSHP 624

Query: 654 XXXPXPXGXXSSPPXTHXPXXPP 722
              P P G    PP T     PP
Sbjct: 625 STPPSPSGPSFHPPPTPHNCSPP 647


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,392,604
Number of Sequences: 37544
Number of extensions: 204320
Number of successful extensions: 476
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3059425352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)