Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_N03
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0516 + 29694631-29695182                                         30   2.8  
01_07_0226 + 42130300-42131430,42131530-42131715,42133244-421333...    29   3.8  
05_07_0326 + 29274287-29274428,29274577-29275379                       29   5.0  
09_04_0385 + 17167174-17167440,17173321-17173962                       28   8.7  

>02_05_0516 + 29694631-29695182
          Length = 183

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +3

Query: 237 WFGRRSKX-PS--AVAGAFSRAWWXWQHKYVQPKKVGMA 344
           W  RRSK  PS  A AG   + WW W   ++  KK G A
Sbjct: 67  WAFRRSKSAPSLGAFAGGPLKRWWDWGVGWLMSKKPGFA 105


>01_07_0226 +
           42130300-42131430,42131530-42131715,42133244-42133345,
           42133425-42133481,42133563-42133658,42133736-42133828,
           42133945-42134064,42134155-42134187,42134266-42134316,
           42135129-42135191
          Length = 643

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -1

Query: 180 SGQERKAXVQQDETPXGKHRKPDXEKSPXHXAKKQXEEDR 61
           SGQ+  A  Q+ +   G+HR P  E  P    K++ ++ +
Sbjct: 30  SGQDAPADQQESDGKRGQHRSPGDEARPDRQLKRRKKKKK 69


>05_07_0326 + 29274287-29274428,29274577-29275379
          Length = 314

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/73 (26%), Positives = 29/73 (39%)
 Frame = -1

Query: 225 RSASTG*MEYQXFQXSGQERKAXVQQDETPXGKHRKPDXEKSPXHXAKKQXEEDRTEVRK 46
           + A T   E Q        +K   Q++E    K ++   ++      KKQ EE+     K
Sbjct: 130 QKAPTAKQEPQPQFDEAPNKKKQQQEEEEEAAKKKQQQLQEEEEATKKKQQEEEEEAAAK 189

Query: 45  VXKKARVGEAXXK 7
             KK +  EA  K
Sbjct: 190 KTKKLQEEEAIAK 202


>09_04_0385 + 17167174-17167440,17173321-17173962
          Length = 302

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 308 LPXPPGSTESSGHGRRXLAAATEPRTD 228
           LP  P +T SSG+ R   +A++ PR D
Sbjct: 146 LPPEPSATTSSGNDRSSSSASSPPRAD 172


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,913,489
Number of Sequences: 37544
Number of extensions: 212984
Number of successful extensions: 583
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)