Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_N03
         (891 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66515-4|CAA91350.1|  153|Caenorhabditis elegans Hypothetical pr...    42   8e-04
Z68751-9|CAA92979.2|  238|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z68337-11|CAA92754.2|  238|Caenorhabditis elegans Hypothetical p...    30   1.9  
U44759-1|AAA86906.1|  405|Caenorhabditis elegans troponin T prot...    30   2.6  
U43282-4|AAA83615.1|  405|Caenorhabditis elegans Muscle position...    30   2.6  

>Z66515-4|CAA91350.1|  153|Caenorhabditis elegans Hypothetical
           protein R53.4 protein.
          Length = 153

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 21/55 (38%), Positives = 25/55 (45%)
 Frame = +3

Query: 153 VXGPXAPARXSGXPDTPFSQLKLNXIGSWFGRRSKXPSAVAGAFSRAWWXWQHKY 317
           V GP    R  G  DT F  +KL  + +W  RR K PSA    F R  W   + Y
Sbjct: 57  VHGPYCHWRYYGKLDTKFMDVKLGDLPAWMARREKTPSAFYNEFMRNIWRVHNLY 111


>Z68751-9|CAA92979.2|  238|Caenorhabditis elegans Hypothetical
           protein T05E11.7 protein.
          Length = 238

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = -1

Query: 180 SGQERKAXVQQDETPXGKHRKPDXEKSPXHXAKKQXEEDRTEVRKVXK 37
           S +E+K   + ++    K +K + EKS    +KK  ++++TE +K  K
Sbjct: 46  SAEEKKNPEKAEDKQNRKSKKSENEKSKKGSSKKSEKKEKTEEKKSKK 93


>Z68337-11|CAA92754.2|  238|Caenorhabditis elegans Hypothetical
           protein T05E11.7 protein.
          Length = 238

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = -1

Query: 180 SGQERKAXVQQDETPXGKHRKPDXEKSPXHXAKKQXEEDRTEVRKVXK 37
           S +E+K   + ++    K +K + EKS    +KK  ++++TE +K  K
Sbjct: 46  SAEEKKNPEKAEDKQNRKSKKSENEKSKKGSSKKSEKKEKTEEKKSKK 93


>U44759-1|AAA86906.1|  405|Caenorhabditis elegans troponin T
           protein.
          Length = 405

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/58 (22%), Positives = 30/58 (51%)
 Frame = -1

Query: 201 EYQXFQXSGQERKAXVQQDETPXGKHRKPDXEKSPXHXAKKQXEEDRTEVRKVXKKAR 28
           E +  +   ++R+A  ++DE    + R+ D E+      +++ + D  ++RK  +K R
Sbjct: 99  ELRELKEKQEKRRAEREEDERQFAERRRQDDERRRKEEDERKAKADAEKIRKNEEKVR 156


>U43282-4|AAA83615.1|  405|Caenorhabditis elegans Muscle positioning
           protein 2 protein.
          Length = 405

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/58 (22%), Positives = 30/58 (51%)
 Frame = -1

Query: 201 EYQXFQXSGQERKAXVQQDETPXGKHRKPDXEKSPXHXAKKQXEEDRTEVRKVXKKAR 28
           E +  +   ++R+A  ++DE    + R+ D E+      +++ + D  ++RK  +K R
Sbjct: 99  ELRELKEKQEKRRAEREEDERQFAERRRQDDERRRKEEDERKAKADAEKIRKNEEKVR 156


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,662,025
Number of Sequences: 27780
Number of extensions: 167990
Number of successful extensions: 452
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)