Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_N02
         (902 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40951-4|AAG01568.1|  756|Caenorhabditis elegans Temporarily ass...    32   0.49 
Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical pr...    31   0.85 
Z68119-1|CAA92191.1|  523|Caenorhabditis elegans Hypothetical pr...    31   0.85 
AC006603-3|AAF39750.1|  204|Caenorhabditis elegans Hypothetical ...    30   2.6  
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF045641-4|AAO91715.1|  332|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF045641-3|AAO91716.1|  368|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z36238-8|CAH04738.1|  448|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z36238-7|CAA85278.2|  506|Caenorhabditis elegans Hypothetical pr...    29   6.0  
AF038619-6|AAB92077.2|  442|Caenorhabditis elegans Hypothetical ...    29   6.0  
U88172-4|AAB42259.1|  224|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF078790-14|AAC26930.1|  335|Caenorhabditis elegans Hypothetical...    28   7.9  

>U40951-4|AAG01568.1|  756|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 130 protein.
          Length = 756

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 431 FLYVLDYIMQFLDYISNYYKNTTVIXFIRVIKYTCAEIYF 550
           F+Y++ YI+  + Y     K    + F  VI +TCA I F
Sbjct: 651 FIYIIYYILMKMIYREKIPKRAIALLFAAVISWTCAGILF 690


>Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical
           protein K07C5.6 protein.
          Length = 647

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -2

Query: 163 EDEAQKTXKXXXTEXRECRRXQKAKDKERATRTRKKEQKXVRKARSR 23
           E++ ++  K    E     R Q+ +DK+R  R RKK +   RK R R
Sbjct: 510 EEKEKEREKERLIEKERRERDQRRRDKKREKRERKKAKLGKRKRRHR 556


>Z68119-1|CAA92191.1|  523|Caenorhabditis elegans Hypothetical
           protein T18D3.1 protein.
          Length = 523

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -2

Query: 172 HQREDEAQKTXKXXXTEXRECRRXQKAKDKERATRTRKKEQKXVRKARSR 23
           H+ E++ +K  K   TE     R +K K KE+  + RK+++   +K R R
Sbjct: 459 HREEEKPKKKDKKHETEEERAERKRKEK-KEKERQERKEKEHDEQKKRHR 507


>AC006603-3|AAF39750.1|  204|Caenorhabditis elegans Hypothetical
           protein B0524.5 protein.
          Length = 204

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -2

Query: 169 QREDEAQKTXKXXXTEXRECRRXQKAKDKERATRTRKKEQKXVRKARS 26
           + +   +K  K   TE  E    +K +DK    + +KKE++   K+++
Sbjct: 115 ENKKSVEKNCKVVKTESGEAEACEKKEDKRNVEKNKKKEKESKEKSKN 162


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -2

Query: 196 ALTAXESQHQREDEAQKTXKXXXTEXRECRRXQKAKDKERATRTRKKEQKXVRKARSR 23
           A+ + E + +R ++         +E  E RR +KAK +++A +  KKE+K  +K R R
Sbjct: 533 AVKSPEMKKRRPNDTDSDVSVD-SEAEEERRRKKAKKEKKAAKKHKKEKKS-KKHRKR 588


>AF045641-4|AAO91715.1|  332|Caenorhabditis elegans Hypothetical
           protein F53H1.4b protein.
          Length = 332

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -2

Query: 181 ESQHQREDEAQKTXKXXXTEXRECRRXQKAKD-KERATRTRKKEQKXVRKARSR 23
           + + ++E E  +  +    E ++ +  +KAK  KE+  + ++KE+K  RKA  +
Sbjct: 205 KEKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAEKK 258


>AF045641-3|AAO91716.1|  368|Caenorhabditis elegans Hypothetical
           protein F53H1.4c protein.
          Length = 368

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -2

Query: 181 ESQHQREDEAQKTXKXXXTEXRECRRXQKAKD-KERATRTRKKEQKXVRKARSR 23
           + + ++E E  +  +    E ++ +  +KAK  KE+  + ++KE+K  RKA  +
Sbjct: 241 KEKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAEKK 294


>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
           protein F53H1.4a protein.
          Length = 1370

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -2

Query: 181 ESQHQREDEAQKTXKXXXTEXRECRRXQKAKD-KERATRTRKKEQKXVRKARSR 23
           + + ++E E  +  +    E ++ +  +KAK  KE+  + ++KE+K  RKA  +
Sbjct: 241 KEKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAEKK 294


>Z36238-8|CAH04738.1|  448|Caenorhabditis elegans Hypothetical
           protein R74.8b protein.
          Length = 448

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -2

Query: 175 QHQREDEAQKTXKXXXTEXRECRRXQKAKDKERATRTRKKEQKXVR 38
           Q ++E+EA+K  +    E R      KAK+++RA   R KE++  R
Sbjct: 73  QEEKEEEARKAREKQIEEER------KAKEEQRANEERAKEERDRR 112


>Z36238-7|CAA85278.2|  506|Caenorhabditis elegans Hypothetical
           protein R74.8a protein.
          Length = 506

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -2

Query: 175 QHQREDEAQKTXKXXXTEXRECRRXQKAKDKERATRTRKKEQKXVR 38
           Q ++E+EA+K  +    E R      KAK+++RA   R KE++  R
Sbjct: 73  QEEKEEEARKAREKQIEEER------KAKEEQRANEERAKEERDRR 112


>AF038619-6|AAB92077.2|  442|Caenorhabditis elegans Hypothetical
           protein F56A11.6 protein.
          Length = 442

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -2

Query: 178 SQHQREDEAQKTXKXXXTEX-RECRRXQKAKDKERATRTRKKEQKXVRKARSR 23
           S+ +RED ++K  +    E  R+ R  +  KD+ER+ + R+   +   + RSR
Sbjct: 335 SRKEREDRSRKDREDRERERSRKEREDRSRKDRERSRQDREDRDRDRDRDRSR 387


>U88172-4|AAB42259.1|  224|Caenorhabditis elegans Hypothetical
           protein ZK354.7 protein.
          Length = 224

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -2

Query: 181 ESQHQREDEAQKTXKXXXTEXRECRRXQKAKDKERATRTRKKEQKXVRKARSR 23
           E   +++DE ++  K    E +E ++  K  DK+ A +  KKE+K   K   +
Sbjct: 136 EKGDEKKDEKKEEKKE---EKKEEKKEDKKDDKKEAKKEEKKEEKKEEKKEEK 185


>AF078790-14|AAC26930.1|  335|Caenorhabditis elegans Hypothetical
           protein F36H12.3 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/45 (22%), Positives = 27/45 (60%)
 Frame = -2

Query: 181 ESQHQREDEAQKTXKXXXTEXRECRRXQKAKDKERATRTRKKEQK 47
           +++  ++DE ++  K    E +E ++ +K ++K+   +  KKE++
Sbjct: 156 DNKDDKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEEE 200


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,201,461
Number of Sequences: 27780
Number of extensions: 129808
Number of successful extensions: 456
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)