Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_M21
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0283 - 22694137-22694952                                         28   8.1  
01_06_1092 + 34469732-34470118                                         28   8.1  

>03_05_0283 - 22694137-22694952
          Length = 271

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 343 GKPTFPSEQGPXYXTLRPGSSLVAQSSRHSLLYVFPS 233
           G   +P+       TL PG  + A S++HSL+Y F S
Sbjct: 96  GSDAYPAVSLANDGTLVPGQDVYAISNQHSLMYSFCS 132


>01_06_1092 + 34469732-34470118
          Length = 128

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +3

Query: 489 IVDGPSKYPSCT--CXREMXPVCGSDGITY 572
           + DG S+   C   C R   PVCG+DG+TY
Sbjct: 46  VSDGGSEAQLCPVRCFRP-DPVCGADGVTY 74


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,049,000
Number of Sequences: 37544
Number of extensions: 312630
Number of successful extensions: 581
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)