Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_M16
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0070 + 27479654-27479672,27479864-27479922,27480339-274803...    57   2e-08
01_06_0260 - 27959188-27959251,27959342-27959424,27960220-279603...    57   2e-08
11_07_0007 - 27262229-27262638,27263252-27263312                       28   8.5  
09_02_0274 + 6611555-6611615,6612229-6612638                           28   8.5  

>05_07_0070 +
           27479654-27479672,27479864-27479922,27480339-27480378,
           27480477-27480565,27481065-27481147,27481219-27481282
          Length = 117

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 27/66 (40%), Positives = 30/66 (45%)
 Frame = +3

Query: 102 RXXXVGXXGXXGXRXGASLRXXVXXXXVXXXAXXXCSFCGXXAXXRSCVGXWSCKRCXXX 281
           R    G  G  G R GASLR  +    V   +   C FCG  A  R  VG W CK C   
Sbjct: 29  RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKV 88

Query: 282 VAGGAW 299
            AGGA+
Sbjct: 89  KAGGAY 94


>01_06_0260 -
           27959188-27959251,27959342-27959424,27960220-27960308,
           27960388-27960427,27960938-27960981,27961240-27961288
          Length = 122

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 27/66 (40%), Positives = 30/66 (45%)
 Frame = +3

Query: 102 RXXXVGXXGXXGXRXGASLRXXVXXXXVXXXAXXXCSFCGXXAXXRSCVGXWSCKRCXXX 281
           R    G  G  G R GASLR  +    V   +   C FCG  A  R  VG W CK C   
Sbjct: 34  RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKV 93

Query: 282 VAGGAW 299
            AGGA+
Sbjct: 94  KAGGAY 99


>11_07_0007 - 27262229-27262638,27263252-27263312
          Length = 156

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/66 (28%), Positives = 24/66 (36%)
 Frame = -1

Query: 844 GXGXPGXGGXXIXAXEGXDTGXPXPXXGGXXVRGXGXGKGAQXANRXAXGGGXVINAXKX 665
           G G PG GG       G   G       G   RG G G+G   + R    GG   ++   
Sbjct: 77  GIGAPG-GGCGGAGHGGGSAGGGRGGGAGGSHRGGGGGRGGGLSGRGHGSGGAGGSSGGG 135

Query: 664 XHTXPG 647
             + PG
Sbjct: 136 RRSLPG 141


>09_02_0274 + 6611555-6611615,6612229-6612638
          Length = 156

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/66 (28%), Positives = 24/66 (36%)
 Frame = -1

Query: 844 GXGXPGXGGXXIXAXEGXDTGXPXPXXGGXXVRGXGXGKGAQXANRXAXGGGXVINAXKX 665
           G G PG GG       G   G       G   RG G G+G   + R    GG   ++   
Sbjct: 77  GIGAPG-GGCGGAGHGGGSAGGGRGGGAGGSHRGGGGGRGGGLSGRGHGSGGAGGSSGGG 135

Query: 664 XHTXPG 647
             + PG
Sbjct: 136 RRSLPG 141


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,028,404
Number of Sequences: 37544
Number of extensions: 86241
Number of successful extensions: 168
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)