Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_M11
(1013 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 41 0.008
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 41 0.008
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 41 0.008
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 41 0.008
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 41 0.008
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 41 0.008
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 41 0.008
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 41 0.008
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 38 0.044
AB075866-1|BAB85572.1| 334|Homo sapiens KIAA1986 protein protein. 31 6.7
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 40.7 bits (91), Expect = 0.008
Identities = 25/60 (41%), Positives = 28/60 (46%)
Frame = +2
Query: 86 MGKIMKPGKXVLVXXXXXXXXXXXX*SRITXKVPPRXHTGHAXVAGIDXYPRQSAQEDGK 265
MGK MKPGK VLV I R ++ HA VAGID YPR+ GK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYS-HALVAGIDRYPRKVTAAMGK 59
Score = 38.3 bits (85), Expect = 0.044
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 237 PGKVXKRMGKXXIHKXSXIXPFVXVVNXNXXMPPRYTXXFXXEXSTA-KDL-XDPA 398
P KV MGK I K S I FV V N N MP RY+ + + KD+ DPA
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPA 105
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 40.7 bits (91), Expect = 0.008
Identities = 25/60 (41%), Positives = 28/60 (46%)
Frame = +2
Query: 86 MGKIMKPGKXVLVXXXXXXXXXXXX*SRITXKVPPRXHTGHAXVAGIDXYPRQSAQEDGK 265
MGK MKPGK VLV I R ++ HA VAGID YPR+ GK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYS-HALVAGIDRYPRKVTAAMGK 59
Score = 38.3 bits (85), Expect = 0.044
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 237 PGKVXKRMGKXXIHKXSXIXPFVXVVNXNXXMPPRYTXXFXXEXSTA-KDL-XDPA 398
P KV MGK I K S I FV V N N MP RY+ + + KD+ DPA
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPA 105
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 40.7 bits (91), Expect = 0.008
Identities = 25/60 (41%), Positives = 28/60 (46%)
Frame = +2
Query: 86 MGKIMKPGKXVLVXXXXXXXXXXXX*SRITXKVPPRXHTGHAXVAGIDXYPRQSAQEDGK 265
MGK MKPGK VLV I R ++ HA VAGID YPR+ GK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYS-HALVAGIDRYPRKVTAAMGK 59
Score = 38.3 bits (85), Expect = 0.044
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 237 PGKVXKRMGKXXIHKXSXIXPFVXVVNXNXXMPPRYTXXFXXEXSTA-KDL-XDPA 398
P KV MGK I K S I FV V N N MP RY+ + + KD+ DPA
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPA 105
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 40.7 bits (91), Expect = 0.008
Identities = 25/60 (41%), Positives = 28/60 (46%)
Frame = +2
Query: 86 MGKIMKPGKXVLVXXXXXXXXXXXX*SRITXKVPPRXHTGHAXVAGIDXYPRQSAQEDGK 265
MGK MKPGK VLV I R ++ HA VAGID YPR+ GK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYS-HALVAGIDRYPRKVTAAMGK 59
Score = 38.3 bits (85), Expect = 0.044
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 237 PGKVXKRMGKXXIHKXSXIXPFVXVVNXNXXMPPRYTXXFXXEXSTA-KDL-XDPA 398
P KV MGK I K S I FV V N N MP RY+ + + KD+ DPA
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPA 105
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 40.7 bits (91), Expect = 0.008
Identities = 25/60 (41%), Positives = 28/60 (46%)
Frame = +2
Query: 86 MGKIMKPGKXVLVXXXXXXXXXXXX*SRITXKVPPRXHTGHAXVAGIDXYPRQSAQEDGK 265
MGK MKPGK VLV I R ++ HA VAGID YPR+ GK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYS-HALVAGIDRYPRKVTAAMGK 59
Score = 38.3 bits (85), Expect = 0.044
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 237 PGKVXKRMGKXXIHKXSXIXPFVXVVNXNXXMPPRYTXXFXXEXSTA-KDL-XDPA 398
P KV MGK I K S I FV V N N MP RY+ + + KD+ DPA
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPA 105
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 40.7 bits (91), Expect = 0.008
Identities = 25/60 (41%), Positives = 28/60 (46%)
Frame = +2
Query: 86 MGKIMKPGKXVLVXXXXXXXXXXXX*SRITXKVPPRXHTGHAXVAGIDXYPRQSAQEDGK 265
MGK MKPGK VLV I R ++ HA VAGID YPR+ GK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYS-HALVAGIDRYPRKVTAAMGK 59
Score = 38.3 bits (85), Expect = 0.044
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 237 PGKVXKRMGKXXIHKXSXIXPFVXVVNXNXXMPPRYTXXFXXEXSTA-KDL-XDPA 398
P KV MGK I K S I FV V N N MP RY+ + + KD+ DPA
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPA 105
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 40.7 bits (91), Expect = 0.008
Identities = 25/60 (41%), Positives = 28/60 (46%)
Frame = +2
Query: 86 MGKIMKPGKXVLVXXXXXXXXXXXX*SRITXKVPPRXHTGHAXVAGIDXYPRQSAQEDGK 265
MGK MKPGK VLV I R ++ HA VAGID YPR+ GK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYS-HALVAGIDRYPRKVTAAMGK 59
Score = 38.3 bits (85), Expect = 0.044
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 237 PGKVXKRMGKXXIHKXSXIXPFVXVVNXNXXMPPRYTXXFXXEXSTA-KDL-XDPA 398
P KV MGK I K S I FV V N N MP RY+ + + KD+ DPA
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPA 105
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 40.7 bits (91), Expect = 0.008
Identities = 25/60 (41%), Positives = 28/60 (46%)
Frame = +2
Query: 86 MGKIMKPGKXVLVXXXXXXXXXXXX*SRITXKVPPRXHTGHAXVAGIDXYPRQSAQEDGK 265
MGK MKPGK VLV I R ++ HA VAGID YPR+ GK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYS-HALVAGIDRYPRKVTAAMGK 59
Score = 38.3 bits (85), Expect = 0.044
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 237 PGKVXKRMGKXXIHKXSXIXPFVXVVNXNXXMPPRYTXXFXXEXSTA-KDL-XDPA 398
P KV MGK I K S I FV V N N MP RY+ + + KD+ DPA
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPA 105
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 38.3 bits (85), Expect = 0.044
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 237 PGKVXKRMGKXXIHKXSXIXPFVXVVNXNXXMPPRYTXXFXXEXSTA-KDL-XDPA 398
P KV MGK I K S I FV V N N MP RY+ + + KD+ DPA
Sbjct: 54 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPA 109
>AB075866-1|BAB85572.1| 334|Homo sapiens KIAA1986 protein protein.
Length = 334
Score = 31.1 bits (67), Expect = 6.7
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 941 SPPQXFHHPXXPIXPSPXPPPS 1006
SPP+ P P PSP PPPS
Sbjct: 180 SPPERAEPPASPTPPSPPPPPS 201
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,945,167
Number of Sequences: 237096
Number of extensions: 905380
Number of successful extensions: 2347
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2175
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13599698196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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