Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_M07
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0078 + 17725931-17726057,17726128-17726305,17726942-177270...    37   0.018
01_01_1151 + 9165454-9165580,9165658-9165835,9167256-9167337,916...    37   0.018
05_06_0257 + 26723858-26724049,26724073-26724230,26724886-267250...    35   0.073
04_04_1418 + 33428527-33428895,33429206-33429280,33429697-334299...    32   0.68 
05_04_0263 + 19534563-19535522                                         30   2.7  
11_03_0072 + 9605273-9606814,9616982-9617016,9617271-9617348,961...    28   8.4  
07_03_0522 - 19021915-19022649,19022725-19023012,19023091-190235...    28   8.4  
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755     28   8.4  

>05_04_0078 +
           17725931-17726057,17726128-17726305,17726942-17727023,
           17728500-17728676,17728763-17728930,17729028-17729219
          Length = 307

 Score = 37.1 bits (82), Expect = 0.018
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 383 ELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
           ++  + G+P  VVGWYHSHP    W S V
Sbjct: 95  DMLKQTGRPEMVVGWYHSHPGFGCWLSGV 123


>01_01_1151 +
           9165454-9165580,9165658-9165835,9167256-9167337,
           9167907-9168083,9168174-9168341,9168466-9168657
          Length = 307

 Score = 37.1 bits (82), Expect = 0.018
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 383 ELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
           ++  + G+P  VVGWYHSHP    W S V
Sbjct: 95  DMLKQTGRPEMVVGWYHSHPGFGCWLSGV 123


>05_06_0257 +
           26723858-26724049,26724073-26724230,26724886-26725024,
           26725130-26725315,26727117-26727310,26728113-26728193,
           26728248-26728338,26728414-26728590
          Length = 405

 Score = 35.1 bits (77), Expect = 0.073
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = +3

Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
           D+ TQ+M+Q M+  FVG+IF+ F ++ + K   +Q+  F
Sbjct: 135 DVRTQAMFQLMEPGFVGLIFSCF-SEDAQKVGKIQVIAF 172


>04_04_1418 +
           33428527-33428895,33429206-33429280,33429697-33429978,
           33430058-33430205,33430309-33430388,33431238-33431318,
           33431416-33431514
          Length = 377

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 362 QATVRAEELAAEV-GQPLRVVGWYHSHPHITVWPSHV 469
           + +V A  L  ++ G+   VVGWYHSHP    W S +
Sbjct: 136 EVSVFANTLMTDLAGRLENVVGWYHSHPGYGCWLSGI 172


>05_04_0263 + 19534563-19535522
          Length = 319

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +3

Query: 681 DTNSASNNLKEE-EDEAFNNEISYDDTDD 764
           DTN+ S  +++E EDE  + +  YD TDD
Sbjct: 287 DTNTLSERVEDEVEDEDLDEDSDYDSTDD 315


>11_03_0072 + 9605273-9606814,9616982-9617016,9617271-9617348,
            9617427-9617501,9617583-9617657,9617731-9617977,
            9618070-9618313,9618852-9619309,9619388-9619675,
            9619751-9619788,9619882-9620452
          Length = 1216

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +3

Query: 663  VNKQFRDTNSASNNLKEEEDEAFNNEISYDDTDDIVTKQHNAAVRT 800
            V K F   +S+ N   +  D  FN ++  DD+++  T      ++T
Sbjct: 880  VFKMFVKPSSSMNGFVKRYDRFFNEKLQKDDSEEFQTSNDKVEIKT 925


>07_03_0522 -
           19021915-19022649,19022725-19023012,19023091-19023548,
           19023939-19024329,19024422-19024668,19024742-19024815,
           19024905-19024961
          Length = 749

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +3

Query: 663 VNKQFRDTNSASNNLKEEEDEAFNNEISYDDTDDIVTKQHNAAVRT 800
           V K F   +S+ N   +  D  FN ++  DD+++  T      ++T
Sbjct: 371 VFKMFVKPSSSMNRFVKRYDRFFNEKLQKDDSEEFQTSNDKVEIKT 416


>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
          Length = 482

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 666 NKQFRDTNSASNNLKEEEDEAFNNEISYDD 755
           +K     NS  N L+E  +E F N+ISYDD
Sbjct: 283 DKMESSLNSLENFLREASEE-FGNDISYDD 311


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,670,983
Number of Sequences: 37544
Number of extensions: 193737
Number of successful extensions: 449
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)