Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_M07
(865 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64643-1|CAA45917.1| 291|Homo sapiens C6.1A protein. 68 4e-11
S72931-1|AAB30469.2| 363|Homo sapiens T-cell receptor alpha cha... 68 4e-11
S68015-1|AAB29005.2| 321|Homo sapiens c6.1A protein. 68 4e-11
BX470111-6|CAO03576.1| 247|Homo sapiens BRCA1/BRCA2-containing ... 68 4e-11
BX470111-5|CAI41654.1| 291|Homo sapiens BRCA1/BRCA2-containing ... 68 4e-11
BX470111-4|CAO03575.1| 292|Homo sapiens BRCA1/BRCA2-containing ... 68 4e-11
BX470111-3|CAI41655.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 68 4e-11
BX470111-2|CAO03574.1| 226|Homo sapiens BRCA1/BRCA2-containing ... 68 4e-11
BX470111-1|CAO03573.1| 90|Homo sapiens BRCA1/BRCA2-containing ... 68 4e-11
BX293995-4|CAO03602.1| 247|Homo sapiens BRCA1/BRCA2-containing ... 68 4e-11
BX293995-3|CAH70538.1| 291|Homo sapiens BRCA1/BRCA2-containing ... 68 4e-11
BX293995-2|CAO03601.1| 292|Homo sapiens BRCA1/BRCA2-containing ... 68 4e-11
BX293995-1|CAH70537.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 68 4e-11
BC006540-1|AAH06540.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 68 4e-11
BC002999-1|AAH02999.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 68 4e-11
AY438030-1|AAR30498.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 68 4e-11
U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated... 37 0.082
BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome, ma... 37 0.082
AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein. 37 0.082
U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog prot... 33 1.0
CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein. 33 1.0
BC032652-1|AAH32652.1| 471|Homo sapiens MPN domain containing p... 33 1.0
BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive photo... 33 1.0
BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive photo... 33 1.0
BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive photo... 33 1.0
AK027887-1|BAB55432.1| 451|Homo sapiens protein ( Homo sapiens ... 33 1.0
AC007292-2|AAD24593.1| 448|Homo sapiens R31167_2, partial prote... 33 1.0
AC007292-1|AAD24592.1| 498|Homo sapiens R31167_1, partial prote... 33 1.0
AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subuni... 33 1.0
U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain bin... 33 1.3
BC033868-1|AAH33868.1| 307|Homo sapiens coiled-coil domain cont... 31 7.2
AY487420-1|AAR39430.1| 271|Homo sapiens hypothetical protein pr... 31 7.2
AL139220-1|CAI19427.1| 307|Homo sapiens novel protein protein. 31 7.2
>X64643-1|CAA45917.1| 291|Homo sapiens C6.1A protein.
Length = 291
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 96 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 134
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 173
>S72931-1|AAB30469.2| 363|Homo sapiens T-cell receptor alpha
chain-c6.1A fusion protein protein.
Length = 363
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 52 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 90
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 91 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 129
>S68015-1|AAB29005.2| 321|Homo sapiens c6.1A protein.
Length = 321
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 101 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 139
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 140 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 178
>BX470111-6|CAO03576.1| 247|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 247
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 96 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 134
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 173
>BX470111-5|CAI41654.1| 291|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 291
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 96 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 134
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 173
>BX470111-4|CAO03575.1| 292|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 292
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 97 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 135
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 136 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 174
>BX470111-3|CAI41655.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 96 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 134
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 173
>BX470111-2|CAO03574.1| 226|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 226
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 72 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 110
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 111 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 149
>BX470111-1|CAO03573.1| 90|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 90
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 38 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 76
>BX293995-4|CAO03602.1| 247|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 247
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 96 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 134
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 173
>BX293995-3|CAH70538.1| 291|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 291
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 96 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 134
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 173
>BX293995-2|CAO03601.1| 292|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 292
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 97 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 135
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 136 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 174
>BX293995-1|CAH70537.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 96 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 134
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 173
>BC006540-1|AAH06540.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 96 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 134
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 173
>BC002999-1|AAH02999.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 96 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 134
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 173
>AY438030-1|AAR30498.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex subunit 36 protein.
Length = 316
Score = 68.1 bits (159), Expect = 4e-11
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 353 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
QL A+ AE LA G+P+RVVGWYHSHPHITVWPSHV
Sbjct: 96 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHV 134
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 471 DLATQSMYQRMDASFVGIIFAVFLTDQSTKXPSVQITXF 587
D+ TQ+MYQ MD FVG+IF+ F+ D++TK V T F
Sbjct: 135 DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCF 173
>U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated
pad1 homolog protein.
Length = 310
Score = 37.1 bits (82), Expect = 0.082
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 383 ELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
++ + G+P VVGWYHSHP W S V
Sbjct: 97 DMLKQTGRPEMVVGWYHSHPGFGCWLSGV 125
>BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 14 protein.
Length = 310
Score = 37.1 bits (82), Expect = 0.082
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 383 ELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
++ + G+P VVGWYHSHP W S V
Sbjct: 97 DMLKQTGRPEMVVGWYHSHPGFGCWLSGV 125
>AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein.
Length = 154
Score = 37.1 bits (82), Expect = 0.082
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 383 ELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
++ + G+P VVGWYHSHP W S V
Sbjct: 97 DMLKQTGRPEMVVGWYHSHPGFGCWLSGV 125
>U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog
protein.
Length = 334
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 383 ELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
E A +VG+ +GWYHSHP W S +
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLSGI 150
>CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein.
Length = 334
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 383 ELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
E A +VG+ +GWYHSHP W S +
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLSGI 150
>BC032652-1|AAH32652.1| 471|Homo sapiens MPN domain containing
protein.
Length = 471
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 410 LRVVGWYHSHPHITVWPS 463
L +VGWYHSHPH PS
Sbjct: 342 LSLVGWYHSHPHSPALPS 359
>BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 383 ELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
E A +VG+ +GWYHSHP W S +
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLSGI 150
>BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 383 ELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
E A +VG+ +GWYHSHP W S +
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLSGI 150
>BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 383 ELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
E A +VG+ +GWYHSHP W S +
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLSGI 150
>AK027887-1|BAB55432.1| 451|Homo sapiens protein ( Homo sapiens
cDNA FLJ14981 fis, clone Y79AA1000202. ).
Length = 451
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 410 LRVVGWYHSHPHITVWPS 463
L +VGWYHSHPH PS
Sbjct: 292 LSLVGWYHSHPHSPALPS 309
>AC007292-2|AAD24593.1| 448|Homo sapiens R31167_2, partial protein
protein.
Length = 448
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 410 LRVVGWYHSHPHITVWPS 463
L +VGWYHSHPH PS
Sbjct: 289 LSLVGWYHSHPHSPALPS 306
>AC007292-1|AAD24592.1| 498|Homo sapiens R31167_1, partial protein
protein.
Length = 498
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 410 LRVVGWYHSHPHITVWPS 463
L +VGWYHSHPH PS
Sbjct: 339 LSLVGWYHSHPHSPALPS 356
>AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subunit 5
variant protein.
Length = 276
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 383 ELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
E A +VG+ +GWYHSHP W S +
Sbjct: 91 ENAKQVGRLENAIGWYHSHPGYGCWLSGI 119
>U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain
binding protein protein.
Length = 334
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 383 ELAAEVGQPLRVVGWYHSHPHITVWPSHV 469
E A +VG +GWYHSHP W S +
Sbjct: 122 ENAKQVGHLENAIGWYHSHPGYGCWLSGI 150
>BC033868-1|AAH33868.1| 307|Homo sapiens coiled-coil domain
containing 24 protein.
Length = 307
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 12 PXCLTSSGLXFPLCSTCWFLRPFXPLFXSXPLQXCXVXPP 131
P C++ + PL S+ LRP PL PLQ C PP
Sbjct: 226 PSCVSPNHRQRPLGSSTQGLRPPLPLCGVAPLQCCLPAPP 265
>AY487420-1|AAR39430.1| 271|Homo sapiens hypothetical protein
protein.
Length = 271
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 12 PXCLTSSGLXFPLCSTCWFLRPFXPLFXSXPLQXCXVXPP 131
P C++ + PL S+ LRP PL PLQ C PP
Sbjct: 190 PSCVSPNHRQRPLGSSTQGLRPPLPLCGVAPLQCCLPAPP 229
>AL139220-1|CAI19427.1| 307|Homo sapiens novel protein protein.
Length = 307
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 12 PXCLTSSGLXFPLCSTCWFLRPFXPLFXSXPLQXCXVXPP 131
P C++ + PL S+ LRP PL PLQ C PP
Sbjct: 226 PSCVSPNHRQRPLGSSTQGLRPPLPLCGVAPLQCCLPAPP 265
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,391,026
Number of Sequences: 237096
Number of extensions: 1141991
Number of successful extensions: 2217
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2217
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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