Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_M06
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0549 - 4051257-4051709,4051967-4052075,4053194-4053252,405...    30   2.7  
06_03_0592 + 22585546-22588573,22588680-22589032                       29   6.3  
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610...    29   6.3  

>01_01_0549 -
           4051257-4051709,4051967-4052075,4053194-4053252,
           4053339-4053445,4053711-4053867,4054110-4054169,
           4055396-4055524,4056027-4056074,4057148-4057214,
           4057948-4058006
          Length = 415

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 469 LCATRXGXRIALFIAEGGPECFQQKTENL 555
           +CA+  G R+AL+  E GPE  +++  +L
Sbjct: 288 ICASIIGQRLALYALEAGPEWIRERVRDL 316


>06_03_0592 + 22585546-22588573,22588680-22589032
          Length = 1126

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 18/81 (22%), Positives = 35/81 (43%)
 Frame = +3

Query: 87  VTMXWXXVLITXFAAGVLADXFXQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLV 266
           VT+ +  +    F  G+    F ++ ++     ++NN   K+P+       F N L  L 
Sbjct: 656 VTLEYLEIQSNFFVGGI-PQSFMKLVSIKEMDISRNNLSGKIPQ-------FLNLLSSLH 707

Query: 267 DLNVLKTEIEEAKPNGALDEV 329
           DLN+     +   P G + ++
Sbjct: 708 DLNLSFNNFDGVIPTGGVFDI 728


>01_05_0439 -
           22159425-22159520,22160137-22160345,22161028-22161066,
           22161196-22161356,22161447-22161518,22162002-22162183,
           22162580-22162703,22164196-22164299,22165526-22165725,
           22165838-22166069,22166156-22166239,22166329-22166386,
           22166724-22166771,22167924-22168081,22168451-22168501,
           22168585-22168658,22168760-22168835,22169685-22169729,
           22169833-22169899,22169978-22170095,22170580-22170775,
           22171551-22171640,22171985-22172039,22172755-22172975,
           22173362-22173454,22173608-22173721,22173918-22173981,
           22174081-22174181,22174306-22174447,22174528-22174729,
           22174883-22174976,22176172-22176348
          Length = 1248

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +3

Query: 291 IEEAKPNGALDEVF-KKYCDKSAQLKGCISSVLQGVRPCVGXEYANXINDAQNSTNQLID 467
           I+ A P+G   + F KK    + Q    +S ++Q +      +Y    N+A+ +TN L+D
Sbjct: 421 IDNASPSGFNTQAFLKKRSRATNQPVESMSMIMQFIETQGFLDYLERCNNAEENTNNLLD 480


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,228,388
Number of Sequences: 37544
Number of extensions: 262607
Number of successful extensions: 490
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)