Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_M06
         (865 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14330-1|CAA74706.1| 1223|Homo sapiens jagged2 protein protein.        33   1.0  
AF111170-2|AAD15562.1| 1238|Homo sapiens Jagged2 protein.              33   1.0  
AF029779-1|AAB84216.1| 1200|Homo sapiens hJAG2.del-E6 protein.         33   1.0  
AF029778-1|AAB84215.1| 1238|Homo sapiens Jagged2 protein.              33   1.0  
AF020201-1|AAB71189.1| 1238|Homo sapiens Jagged 2 protein.             33   1.0  
AF003521-1|AAB61285.1| 1238|Homo sapiens Jagged 2 protein.             33   1.0  

>Y14330-1|CAA74706.1| 1223|Homo sapiens jagged2 protein protein.
          Length = 1223

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 47  SCVSNLSKSNXFPCYNXVXXCLD--NXFRCRCVG*XLXSDYSGCDLAMHQEQC*RQSP 214
           +C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C + SP
Sbjct: 770 TCTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 820


>AF111170-2|AAD15562.1| 1238|Homo sapiens Jagged2 protein.
          Length = 1238

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 47  SCVSNLSKSNXFPCYNXVXXCLD--NXFRCRCVG*XLXSDYSGCDLAMHQEQC*RQSP 214
           +C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C + SP
Sbjct: 785 TCTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 835


>AF029779-1|AAB84216.1| 1200|Homo sapiens hJAG2.del-E6 protein.
          Length = 1200

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 47  SCVSNLSKSNXFPCYNXVXXCLD--NXFRCRCVG*XLXSDYSGCDLAMHQEQC*RQSP 214
           +C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C + SP
Sbjct: 747 TCTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 797


>AF029778-1|AAB84215.1| 1238|Homo sapiens Jagged2 protein.
          Length = 1238

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 47  SCVSNLSKSNXFPCYNXVXXCLD--NXFRCRCVG*XLXSDYSGCDLAMHQEQC*RQSP 214
           +C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C + SP
Sbjct: 785 TCTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 835


>AF020201-1|AAB71189.1| 1238|Homo sapiens Jagged 2 protein.
          Length = 1238

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 47  SCVSNLSKSNXFPCYNXVXXCLD--NXFRCRCVG*XLXSDYSGCDLAMHQEQC*RQSP 214
           +C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C + SP
Sbjct: 785 TCTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 835


>AF003521-1|AAB61285.1| 1238|Homo sapiens Jagged 2 protein.
          Length = 1238

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 47  SCVSNLSKSNXFPCYNXVXXCLD--NXFRCRCVG*XLXSDYSGCDLAMHQEQC*RQSP 214
           +C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C + SP
Sbjct: 785 TCTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 835


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,373,787
Number of Sequences: 237096
Number of extensions: 1380772
Number of successful extensions: 2634
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2634
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)