Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_L24
(1163 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.004
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 37 0.005
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.011
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.043
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.13
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.31
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 30 0.53
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.6
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 28 2.9
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 3.8
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 5.0
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 6.6
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.5 bits (83), Expect = 0.004
Identities = 28/90 (31%), Positives = 32/90 (35%), Gaps = 8/90 (8%)
Frame = +3
Query: 465 PPXPQXLPXX----PXXSXXXXXXHLPXPPPXXP--QXP--PXXXHXXRPTXXPPKXXPP 620
PP P+ P P S + P PPP P P P + R T PP PP
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASR-TSTPPVPTPP 421
Query: 621 PNXPXXPPPXTXRTPQTXPPXXXPPPPLXP 710
P PP P + P PPL P
Sbjct: 422 SLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 33.1 bits (72), Expect = 0.076
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = +3
Query: 528 LPXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXP--PPXTXRTPQTXP-PXXXPPP 698
+P PP P PP P+ PP P P PP P P P P P
Sbjct: 417 VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Query: 699 PLXP 710
P P
Sbjct: 477 PPAP 480
Score = 31.5 bits (68), Expect = 0.23
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = +3
Query: 453 PS*NPPXPQXLPXXPXXSXXXXXXHLPXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXP 632
PS P P LP S P PP P PP PP PP P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Query: 633 XXPP 644
P
Sbjct: 481 APAP 484
Score = 29.9 bits (64), Expect = 0.71
Identities = 24/92 (26%), Positives = 29/92 (31%), Gaps = 2/92 (2%)
Frame = +2
Query: 809 PXPTXXXHXRXPXPRXXPXSXNNXPTPXXXPPAXXXXXXXXXXSHAPXNPPXSPXHXPXT 988
P P R P S ++ P P P + PP P P T
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 989 -LLPAP-NSKRALSXHPDXPPXXLSXXXPPXP 1078
P P +S RA+S P PP P P
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP 404
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Frame = +3
Query: 882 PPPXXLXPLXPPXLXPXXPPT----PPXTPPXP 968
P P L P PP L P PP+ P PP P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +3
Query: 552 PQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPX--TXRTPQTXPPXXXPPPPLXPXXXXT 725
P PP P P P P P PPP T +P PP P + P T
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAP--PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINST 287
Score = 28.7 bits (61), Expect = 1.6
Identities = 31/149 (20%), Positives = 40/149 (26%), Gaps = 3/149 (2%)
Frame = +3
Query: 531 PXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXPPPPLXP 710
P PP + P + + PP PP + P + PP PPP P
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPP---PPPRSAP 370
Query: 711 XXXXTXLXQAXAXXXTXPXXXXXXXXXXXXXXXXXXRVXXTSXXXXHEXXLXXXTTPPPP 890
+ + + P + S P P
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP--LGNASRTSTPPVPTPPSLPPSAP 428
Query: 891 XXLXPLXPPXLX---PXXPPTPPXTPPXP 968
L P PP L P PP PP P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAP 457
Score = 27.5 bits (58), Expect = 3.8
Identities = 21/85 (24%), Positives = 25/85 (29%), Gaps = 3/85 (3%)
Frame = +3
Query: 465 PPXPQXLPXXPXXSXXXXXXHLPXPPPXXPQXPPXXXHXX---RPTXXPPKXXPPPNXPX 635
PP + P LP PPP R PP P+
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGR 374
Query: 636 XPPPXTXRTPQTXPPXXXPPPPLXP 710
PPP + + PP PPP P
Sbjct: 375 QPPPLSSSRAVSNPP---APPPAIP 396
Score = 27.1 bits (57), Expect = 5.0
Identities = 21/89 (23%), Positives = 23/89 (25%), Gaps = 4/89 (4%)
Frame = +3
Query: 426 PGRXTLXMXPS*NPPXPQXLPXXPXXSXXXXXXHLPXPPPXXPQXPPXXXHXXRPTXXPP 605
P R P N LP P +P PP PP T P
Sbjct: 317 PSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP 376
Query: 606 ----KXXPPPNXPXXPPPXTXRTPQTXPP 680
N P PP R+ PP
Sbjct: 377 PPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 26.2 bits (55), Expect = 8.7
Identities = 13/45 (28%), Positives = 14/45 (31%)
Frame = +3
Query: 531 PXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTP 665
P PP P P PP PP N PP + P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +3
Query: 540 PPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXPPP 698
PP P P PT PP+ PP P PP + P P PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPI--PSSLPPP 174
Score = 34.3 bits (75), Expect = 0.033
Identities = 23/63 (36%), Positives = 24/63 (38%), Gaps = 7/63 (11%)
Frame = +3
Query: 537 PPPXXPQXPPXXXHXXRPTXXPP--KXXPPPNXPXXP---PPXTXRTPQTXP--PXXXPP 695
PPP PP P+ PP PPP P P PP P P P PP
Sbjct: 150 PPPSPASAPPI------PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 696 PPL 704
PPL
Sbjct: 204 PPL 206
Score = 32.7 bits (71), Expect = 0.10
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = +3
Query: 531 PXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXPPPPL 704
P PP + P RP+ PP P P PP P + PP P P+
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP----IPSSLPPPAQPAAPV 181
Score = 31.1 bits (67), Expect = 0.31
Identities = 18/71 (25%), Positives = 22/71 (30%)
Frame = +3
Query: 453 PS*NPPXPQXLPXXPXXSXXXXXXHLPXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXP 632
P+ PP P P P + P P P P P+ PP P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Query: 633 XXPPPXTXRTP 665
PPP + P
Sbjct: 200 KVPPPPLSQAP 210
Score = 29.5 bits (63), Expect = 0.93
Identities = 21/83 (25%), Positives = 23/83 (27%), Gaps = 4/83 (4%)
Frame = +3
Query: 465 PPXPQXLPXXPXXSXXXXXXHLPXPPPXXPQXP----PXXXHXXRPTXXPPKXXPPPNXP 632
PP P S +P PP P P P RP+ P PN
Sbjct: 173 PPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVT 232
Query: 633 XXPPPXTXRTPQTXPPXXXPPPP 701
P R P P PP
Sbjct: 233 SESPKFPNRGPSIPSASVPPVPP 255
Score = 28.7 bits (61), Expect = 1.6
Identities = 23/96 (23%), Positives = 24/96 (25%), Gaps = 2/96 (2%)
Frame = +3
Query: 873 TTPPPPXXLXPLXPPXLXPXXPPTPPXTPPXPXXTXXXXXXXXXTRKEXSPXIQTXLPXX 1052
+ P PP L PP P P P PP P P Q P
Sbjct: 126 SAPAPPTPQSELRPPTSAPPRPSIP---PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 1053 S--QXXLXPXLTXPXTTXXTPPPAXXXXTXXVXXRP 1154
S P P PPP RP
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRP 218
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +3
Query: 618 PPNXPXXPPPXT-XRTPQTXPPXXXPPPP 701
PP+ P P P + R P + PP PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPP 152
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.9 bits (79), Expect = 0.011
Identities = 23/86 (26%), Positives = 29/86 (33%), Gaps = 3/86 (3%)
Frame = +3
Query: 453 PS*NPPXPQX-LPXXPXXSXXXXXXHLPXPPPXXPQXPPXXXHXX--RPTXXPPKXXPPP 623
PS PP P+ + P + +P P P PP +P+ P PP
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Query: 624 NXPXXPPPXTXRTPQTXPPXXXPPPP 701
P P P P P PP P
Sbjct: 1215 TAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 35.1 bits (77), Expect = 0.019
Identities = 20/78 (25%), Positives = 24/78 (30%)
Frame = +3
Query: 468 PXPQXLPXXPXXSXXXXXXHLPXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPP 647
P P P P S +P P P+ P+ PP P P P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 648 XTXRTPQTXPPXXXPPPP 701
+ P P PP P
Sbjct: 1175 SSGIPPVPKPAAGVPPVP 1192
Score = 32.3 bits (70), Expect = 0.13
Identities = 33/146 (22%), Positives = 37/146 (25%)
Frame = +3
Query: 531 PXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXPPPPLXP 710
P PP P P PT PPK PP+ P P T +P P P L
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDH-PPSAPLSKPVST--SPAAPLARVPPVPKLSS 1019
Query: 711 XXXXTXLXQAXAXXXTXPXXXXXXXXXXXXXXXXXXRVXXTSXXXXHEXXLXXXTTPPPP 890
L A A P S + P P
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Query: 891 XXLXPLXPPXLXPXXPPTPPXTPPXP 968
P+ P P P PP P
Sbjct: 1080 SGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 31.1 bits (67), Expect = 0.31
Identities = 21/79 (26%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Frame = +3
Query: 468 PXPQXLPXXPXXSXXXXXXHLPXPPPXXPQXPPXXXHXXRP-TXXPPKXXPPPNXPXXPP 644
P P P P S P P P+ P + PP P P PP
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 645 PXTXRTPQTXPPXXXPPPP 701
P + P P PP P
Sbjct: 1194 P-SEAPPVPKPSVGVPPVP 1211
Score = 30.7 bits (66), Expect = 0.40
Identities = 20/81 (24%), Positives = 24/81 (29%), Gaps = 3/81 (3%)
Frame = +3
Query: 465 PPXPQXLPXXPXXSXXXXXXHLPXPPPXXPQXPPXXXHXXRPTXX---PPKXXPPPNXPX 635
PP P+ P +P P P PP PT PP P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Query: 636 XPPPXTXRTPQTXPPXXXPPP 698
P P + + P P P
Sbjct: 1239 VPAPSSEAPSVSTPRSSVPSP 1259
Score = 30.3 bits (65), Expect = 0.53
Identities = 21/78 (26%), Positives = 22/78 (28%)
Frame = +3
Query: 468 PXPQXLPXXPXXSXXXXXXHLPXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPP 647
P P P P S P PP P P+ PP P P P P
Sbjct: 1044 PIPTSTPPVPKSSSGA-----PSAPPPVPAPSSEIPSIPAPSGAPP-VPAPSGIPPVPKP 1097
Query: 648 XTXRTPQTXPPXXXPPPP 701
P P PP P
Sbjct: 1098 SVAAPPVPKPSVAVPPVP 1115
Score = 30.3 bits (65), Expect = 0.53
Identities = 34/177 (19%), Positives = 44/177 (24%), Gaps = 2/177 (1%)
Frame = +3
Query: 453 PS*NPPXPQXLPXXPXXSXXXXXXHLPXPP--PXXPQXPPXXXHXXRPTXXPPKXXPPPN 626
PS PP P P +P P P P+ +P+ P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 627 XPXXPPPXTXRTPQTXPPXXXPPPPLXPXXXXTXLXQAXAXXXTXPXXXXXXXXXXXXXX 806
P P P + P P PP P + A P
Sbjct: 1120 APPVPKP-SVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGI 1178
Query: 807 XXXXRVXXTSXXXXHEXXLXXXTTPPPPXXLXPLXPPXLXPXXPPTPPXTPPXPXXT 977
+ + P P + P+ PP P P PP P T
Sbjct: 1179 PPVPK--PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPT 1233
Score = 26.6 bits (56), Expect = 6.6
Identities = 24/96 (25%), Positives = 27/96 (28%), Gaps = 4/96 (4%)
Frame = +3
Query: 426 PGRXTLXMXPS*NPPXP-QXLPXXPXXSXXXXXXHLPXPPPXXPQXPPXXXHXXRPTXXP 602
P L S +P P +P P S LP P PT P
Sbjct: 991 PPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP 1050
Query: 603 PKXXPPPNXPXXPPP---XTXRTPQTXPPXXXPPPP 701
P P PPP + P P PP P
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 26.6 bits (56), Expect = 6.6
Identities = 23/86 (26%), Positives = 26/86 (30%), Gaps = 7/86 (8%)
Frame = +3
Query: 465 PPXPQX---LPXXPXXSXXXXXXHLPXPPPXXP---QXPPXXXHXX-RPTXXPPKXXPPP 623
PP P+ P P S +P P P PP P+ PP P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 624 NXPXXPPPXTXRTPQTXPPXXXPPPP 701
P P P P P PP P
Sbjct: 1072 EIPSIPAPSG--APPVPAPSGIPPVP 1095
Score = 26.2 bits (55), Expect = 8.7
Identities = 22/94 (23%), Positives = 29/94 (30%), Gaps = 2/94 (2%)
Frame = +2
Query: 842 PXPRXXPXSX-NNXPTPXXXPPAXXXXXXXXXXSHAPXNPPXSPXHXPXTLLPAPNSKRA 1018
P P P S + P P PP + PP +PAP+
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 1019 L-SXHPDXPPXXLSXXXPPXPHTSLXNXXHPXPS 1117
+ PP + PP P S+ P PS
Sbjct: 1123 VPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPS 1156
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.043
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 876 TPPPPXXLXPLXPPXLXPXXPPTPPXTPPXP 968
TPPPP P PP P P PP PP P
Sbjct: 1706 TPPPPPMSVP--PPPSAPPMPAGPPSAPPPP 1734
Score = 31.5 bits (68), Expect = 0.23
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 540 PPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXPPPPL 704
P PP P PPP PPP P P PPPPL
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSA--PPMPAGPPSAPPPPL 1735
Score = 29.1 bits (62), Expect = 1.2
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = +3
Query: 465 PPXPQXLPXXPXXSXXXXXXHLPXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPP 644
P P P S P PPP PP P PP PP+ P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPP-------PPSAPPMPAGPPSAP--PP 1733
Query: 645 PXTXRTPQTXP 677
P + + P
Sbjct: 1734 PLPASSAPSVP 1744
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/60 (28%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Frame = +3
Query: 525 HLPXPPPXXPQXP-PXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXPPPP 701
H PP PQ P P P PPP+ P P P P P P
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 28.3 bits (60), Expect = 2.2
Identities = 19/65 (29%), Positives = 23/65 (35%), Gaps = 5/65 (7%)
Frame = +3
Query: 531 PXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPN--XPXXPPPXTXRTPQT---XPPXXXPP 695
P PP Q PP + P+ P PP+ P P T Q+ P PP
Sbjct: 1476 PAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPP 1535
Query: 696 PPLXP 710
P P
Sbjct: 1536 APQHP 1540
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 585 RPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXPPPPLXP 710
RP P P P PPP + P + PP PP P
Sbjct: 1693 RPQSAAPPQMSAPTPP--PPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 603 PKXXPPPNXPXXPPPXTXRTPQTXPPXXXPPPPLXP 710
P PP PP PP PPPP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +3
Query: 531 PXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPP 647
P PP P P P PP P + P P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.3 bits (70), Expect = 0.13
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 615 PPPNXPXXPPPXTXRTPQTXPPXXXPPPP 701
PP N P PPP P PP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP---PPPP 30
Score = 26.2 bits (55), Expect = 8.7
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 540 PPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTP 665
PP P PP P PP PPP P +TP
Sbjct: 5 PPGNPPPPPPP-----PGFEPPSQPPPPPPPGYVKKRKNKTP 41
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.31
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Frame = +3
Query: 879 PPPPXXLXPLXPPXLXPXXPPTP----PXTPPXP 968
PPPP + P P P PP P P PP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 30.3 bits (65), Expect = 0.53
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 4/51 (7%)
Frame = +3
Query: 561 PPXXXHXXRPTXXPPKXXPPPNXPXX----PPPXTXRTPQTXPPXXXPPPP 701
PP PT P PP P PPP PP PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.71
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +3
Query: 531 PXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXPPP 698
P PPP P P P PPP P PP P PP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP--PPPPPGVAGAGP---PPPPPPPP 783
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/58 (25%), Positives = 16/58 (27%)
Frame = +3
Query: 537 PPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXPPPPLXP 710
P P P + P PP P P P P PPPP P
Sbjct: 710 PSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 882 PPPXXLXPLXPPXLXPXXPPTPPXTPP 962
PPP P PP + PP PP PP
Sbjct: 761 PPP----PPPPPGVAGAGPPPPPPPPP 783
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 30.3 bits (65), Expect = 0.53
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Frame = +3
Query: 525 HLPXPP----PXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXP 692
H+P PP P PP H PP P PPP P P
Sbjct: 206 HMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM-----HHEPGEHMP 260
Query: 693 PPPL 704
PPP+
Sbjct: 261 PPPM 264
Score = 30.3 bits (65), Expect = 0.53
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Frame = +3
Query: 525 HLPXPP----PXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXP 692
H+P PP P PP H PP P PPP P P
Sbjct: 219 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM-----HHEPGEHMP 273
Query: 693 PPPL 704
PPP+
Sbjct: 274 PPPM 277
Score = 30.3 bits (65), Expect = 0.53
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Frame = +3
Query: 525 HLPXPP----PXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXP 692
H+P PP P PP H PP P PPP P P
Sbjct: 232 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM-----HHEPGEHMP 286
Query: 693 PPPL 704
PPP+
Sbjct: 287 PPPM 290
Score = 30.3 bits (65), Expect = 0.53
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Frame = +3
Query: 525 HLPXPP----PXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXP 692
H+P PP P PP H PP P PPP P P
Sbjct: 245 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM-----HHEPGEHMP 299
Query: 693 PPPL 704
PPP+
Sbjct: 300 PPPM 303
Score = 30.3 bits (65), Expect = 0.53
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Frame = +3
Query: 525 HLPXPP----PXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXP 692
H+P PP P PP H PP P PPP P P
Sbjct: 258 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM-----HHEPGEHMP 312
Query: 693 PPPL 704
PPP+
Sbjct: 313 PPPM 316
Score = 30.3 bits (65), Expect = 0.53
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Frame = +3
Query: 525 HLPXPP----PXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXP 692
H+P PP P PP H PP P PPP P P
Sbjct: 271 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM-----HHEPGEHMP 325
Query: 693 PPPL 704
PPP+
Sbjct: 326 PPPM 329
Score = 29.5 bits (63), Expect = 0.93
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 4/63 (6%)
Frame = +3
Query: 525 HLPXPP----PXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXP 692
H+P PP P PP H PP P PPP P P
Sbjct: 284 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM-----HHEPGEHMP 338
Query: 693 PPP 701
PPP
Sbjct: 339 PPP 341
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/59 (27%), Positives = 17/59 (28%), Gaps = 2/59 (3%)
Frame = +3
Query: 540 PPXXPQXPPXXXHXXRPTXXPPKXXPPPNX--PXXPPPXTXRTPQTXPPXXXPPPPLXP 710
PP P PP P P PP T + P PPPP P
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLP 247
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.9 bits (59), Expect = 2.9
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 531 PXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPP 680
P P P+ P H P+ PP P P P R P T PP
Sbjct: 350 PSPRSGRPRRSPSPSHLSIPSTLPPADGVPKPTPDGFPRRFERDP-TIPP 398
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.5 bits (58), Expect = 3.8
Identities = 13/46 (28%), Positives = 14/46 (30%)
Frame = +3
Query: 531 PXPPPXXPQXPPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQ 668
P PPP PP P PP P P + PQ
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAPQ 251
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +3
Query: 588 PTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXPPPP 701
P K PPP P R+ PP PP P
Sbjct: 42 PAPVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAP 79
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.6 bits (56), Expect = 6.6
Identities = 13/48 (27%), Positives = 15/48 (31%)
Frame = +3
Query: 561 PPXXXHXXRPTXXPPKXXPPPNXPXXPPPXTXRTPQTXPPXXXPPPPL 704
PP + P P N P P P T P P PP+
Sbjct: 461 PPWQQPTQQSAVQPSNLVPSQNAPFIPGTSAPLPPTTFAPPGVPLPPI 508
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.134 0.451
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,802,217
Number of Sequences: 5004
Number of extensions: 21347
Number of successful extensions: 297
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 623552966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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