Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_L23
(879 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 100 1e-21
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 99 5e-21
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 97 1e-20
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 34 0.17
07_03_1509 - 27246721-27247350 29 3.7
03_05_0411 - 23972738-23973606,23977701-23977794,23978487-239785... 29 3.7
09_03_0039 + 11799277-11799486,11799565-11799710,11800758-118008... 29 6.5
12_02_0615 + 21242819-21243201,21244510-21244630,21244728-212448... 28 8.6
02_01_0254 - 1669461-1669590,1669833-1672318 28 8.6
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 100 bits (240), Expect = 1e-21
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 312 KNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGYCS 461
KN GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQG C+
Sbjct: 78 KNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCA 127
Score = 94.3 bits (224), Expect = 1e-19
Identities = 46/82 (56%), Positives = 56/82 (68%)
Frame = +1
Query: 454 TVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKL 633
T ARV IGQ ++SVR + EALRRAKFKFPGRQKI S+KWGFTK+ R+E+ KL
Sbjct: 125 TCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKL 184
Query: 634 REEGRLANDGCIVQYRPEHGPL 699
+ EGR+ +DG Q HG L
Sbjct: 185 KAEGRIMSDGVNAQLLGSHGRL 206
Score = 92.7 bits (220), Expect = 4e-19
Identities = 43/72 (59%), Positives = 50/72 (69%)
Frame = +2
Query: 146 CRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLXKELRK 325
CRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +SSEALEA RI CNKY+ K K
Sbjct: 23 CRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGK 82
Query: 326 GSVPYPHETSPF 361
+ PF
Sbjct: 83 DAFHLRVRVHPF 94
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1
Query: 79 MGRRPARCYRYCKNKPYPKSRFLSGCT*SQDPYLR 183
MGRRPARCYR KNKPYPKSR+ G DP +R
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGV---PDPKIR 32
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 98.7 bits (235), Expect = 5e-21
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 312 KNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGYCS 461
K+ GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQG C+
Sbjct: 74 KSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCA 123
Score = 89.8 bits (213), Expect = 2e-18
Identities = 42/70 (60%), Positives = 50/70 (71%)
Frame = +1
Query: 454 TVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKL 633
T ARV IGQ ++SVR EALRRAKFKFPGRQKI S+KWGFTK+ RDE+ +L
Sbjct: 121 TCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRL 180
Query: 634 REEGRLANDG 663
+ EGR+ DG
Sbjct: 181 KSEGRIMPDG 190
Score = 87.4 bits (207), Expect = 1e-17
Identities = 41/72 (56%), Positives = 49/72 (68%)
Frame = +2
Query: 146 CRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLXKELRK 325
CRGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA RI CNKY+ K K
Sbjct: 19 CRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGK 78
Query: 326 GSVPYPHETSPF 361
+ PF
Sbjct: 79 DAFHLRVRVHPF 90
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +1
Query: 100 CYRYCKNKPYPKSRFLSGCT*SQDPYLR 183
CYR KNKPYPKSR+ G DP +R
Sbjct: 4 CYRQIKNKPYPKSRYCRGV---PDPKIR 28
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 97.5 bits (232), Expect = 1e-20
Identities = 53/95 (55%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Frame = +2
Query: 59 VTL*RSPWGAGQRDATGTAKINR-IRNRGS-----CRGVPDPKIRIFDLGKKRATVDDFP 220
V L SP A TG + R I+N+ CRGVPDPKIRIFD+G+K+ + DDFP
Sbjct: 295 VRLGESPTHALSAQLTGPVRCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFP 354
Query: 221 LCVHLVSDEYEQLSSEALEAGRICCNKYLXKELRK 325
LCVHLVS E E +SSEALEA RI CNKY+ K K
Sbjct: 355 LCVHLVSWEKENVSSEALEAARIACNKYMAKHAGK 389
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/80 (56%), Positives = 56/80 (70%)
Frame = +1
Query: 454 TVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKL 633
T ARVRIGQ ++SVR D A EALRRAKFKFPGRQ++ S KWGFT+++RDE+ KL
Sbjct: 432 TCARVRIGQVLLSVRCRDANAAHAQEALRRAKFKFPGRQRVIFSAKWGFTRFKRDEYLKL 491
Query: 634 REEGRLANDGCIVQYRPEHG 693
+ EGR+ DG + HG
Sbjct: 492 KSEGRIVPDGVNAKLLTRHG 511
Score = 91.1 bits (216), Expect = 1e-18
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = +3
Query: 312 KNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGYCS 461
K+ GKD FH+R+ HP+HV+RINKMLSCAGADRLQTGMRGAFGKP G C+
Sbjct: 385 KHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCA 434
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +2
Query: 203 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLXKELR---KGSVP 337
T D P C +HL SD Y S E ++AG+ C L KEL +G VP
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVP 635
>07_03_1509 - 27246721-27247350
Length = 209
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +2
Query: 473 LDSPSCPCALVTGGRHRSSRL---CAVP--SSSSPDVKRSTYQRSGVS 601
L P PC RH RL +P +SSSP+++R+T R+G S
Sbjct: 132 LQPPLSPCLSAGRRRHHLPRLHDAALIPGITSSSPELRRNTVARAGFS 179
>03_05_0411 -
23972738-23973606,23977701-23977794,23978487-23978549,
23979558-23979630,23980325-23980375,23980491-23980906,
23981066-23981396,23983165-23983223,23983799-23983975
Length = 710
Score = 29.5 bits (63), Expect = 3.7
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +2
Query: 74 SPWG-AGQRDATGTAKINRIRNRGSCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEY 250
+P G G+R T K +R G G+ DP + D G+K A P + V
Sbjct: 130 TPTGLTGRRTRAVTRKAAALRGLGP--GIDDPVKKEIDNGEKHAQNSSLPTNLGKVPQTR 187
Query: 251 EQLSSEALEAGRICCNK 301
Q+SS A EA NK
Sbjct: 188 RQMSSNA-EASNHSSNK 203
>09_03_0039 +
11799277-11799486,11799565-11799710,11800758-11800860,
11800996-11801182,11801299-11801392,11801530-11801683,
11801963-11802067,11802151-11802267,11802688-11802801,
11803171-11803260,11803875-11804057,11809196-11809550,
11809574-11809643,11809993-11810167,11810251-11810351,
11810390-11810516,11810639-11810716,11811926-11812270
Length = 917
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/42 (23%), Positives = 26/42 (61%)
Frame = -1
Query: 744 RLYIEDXSLNLPPSVERSMFRAVLHNAAVISEAALFTQLLKL 619
+++ +D + +LPP ++ + +V+HN + + + + LLK+
Sbjct: 685 QIFFDDRNTSLPPDTRKAAYLSVMHNVSSTNRSG-YDALLKI 725
>12_02_0615 +
21242819-21243201,21244510-21244630,21244728-21244847,
21245015-21245245,21245365-21245862
Length = 450
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 282 PASKASELSCSYSSDTKCTHSGKSSTVALFLPKSKIRILGSGTPRQEPRFRI 127
P++ AS S S +CT+ GK ++V L + R+ G + E FRI
Sbjct: 125 PSASASVFGVSAES-MQCTYDGKGNSVPTILLHMQERLYAQGGLKAEGIFRI 175
>02_01_0254 - 1669461-1669590,1669833-1672318
Length = 871
Score = 28.3 bits (60), Expect = 8.6
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = -1
Query: 753 VXIRLYIEDXSLNLPPSVERSMFRAVLHNAAVISEAALFTQLLKLITFILCETPLL*YVD 574
V +RL++ S PPS + F A + AA +AAL LL+ + + P L +
Sbjct: 24 VALRLFLHLTSAASPPSPHSTSFLARILAAAAAHDAALLPSLLRHLLSLPDPAPHLLALL 83
Query: 573 LLTSGELELGTAQSLD---DLCLPP 508
+S L L SL LC P
Sbjct: 84 SSSSSPLRLPLGFSLSAFRSLCALP 108
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,462,549
Number of Sequences: 37544
Number of extensions: 534795
Number of successful extensions: 1565
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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