Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_L19
         (858 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC084578-1|AAH84578.1|  719|Homo sapiens AGRN protein protein.         31   4.1  
AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.               31   4.1  
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.      31   4.1  
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.                31   4.1  
AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein.     31   5.4  

>BC084578-1|AAH84578.1|  719|Homo sapiens AGRN protein protein.
          Length = 719

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = +2

Query: 404 RCVAPPXGPVCAFDAXGTXRXFATLCELEAVSCRESXYYAVXXLGVC 544
           RC  PP GPVC  D       + + CEL   +C +         G C
Sbjct: 104 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 146


>AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.
          Length = 2045

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = +2

Query: 404 RCVAPPXGPVCAFDAXGTXRXFATLCELEAVSCRESXYYAVXXLGVC 544
           RC  PP GPVC  D       + + CEL   +C +         G C
Sbjct: 622 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 664


>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
          Length = 2026

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = +2

Query: 404 RCVAPPXGPVCAFDAXGTXRXFATLCELEAVSCRESXYYAVXXLGVC 544
           RC  PP GPVC  D       + + CEL   +C +         G C
Sbjct: 603 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 645


>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
          Length = 2045

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = +2

Query: 404 RCVAPPXGPVCAFDAXGTXRXFATLCELEAVSCRESXYYAVXXLGVC 544
           RC  PP GPVC  D       + + CEL   +C +         G C
Sbjct: 622 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 664


>AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein.
          Length = 1004

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = -2

Query: 422 PAGPRTXLHTAXXXPPXGPSLGPAHPGXSYPXRXLL*RXP 303
           PA PR+    A   P   P LGP  PG   P R    R P
Sbjct: 454 PAAPRSIKVEAVEEPEAAPILGPGEPGPQAPSRTPSPRSP 493


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,781,523
Number of Sequences: 237096
Number of extensions: 851641
Number of successful extensions: 1583
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)