Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_L14
(882 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 289 4e-79
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 289 5e-79
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 289 5e-79
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 155 6e-39
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 143 3e-35
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 87 2e-18
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 48 1e-06
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 44 3e-05
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 35 0.013
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.023
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 33 0.041
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.38
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 30 0.50
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.66
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 2.0
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 2.0
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.7
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 26 6.2
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 289 bits (709), Expect = 4e-79
Identities = 141/214 (65%), Positives = 157/214 (73%)
Frame = +1
Query: 139 LHXVVIGPVXSGXSXPXGXLXSKCGGXAXRXXEXFXXAAQXMGKGSFKYAWVLDKLKAER 318
++ VVIG V SG S G L KCGG R E F A +GKGSFKYAWVLDKLKAER
Sbjct: 8 INVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAER 67
Query: 319 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 498
ERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGI
Sbjct: 68 ERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGI 127
Query: 499 SKNGQXREHALLAFTLGVXQLIVGVNKMDSTEXXYSEPRFEEXXXXXXXXXXXXGYNPXX 678
SK+GQ REHALLA+TLGV QLIV VNKMD+T +S+ RFEE G+NP
Sbjct: 128 SKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKT 185
Query: 679 VXFVPISGWXGEXMLEPXTKMPWXKGWXVXRKEG 780
V FVP+SG+ G+ M+EP T MPW +GW K G
Sbjct: 186 VPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAG 219
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 289 bits (708), Expect = 5e-79
Identities = 140/214 (65%), Positives = 157/214 (73%)
Frame = +1
Query: 139 LHXVVIGPVXSGXSXPXGXLXSKCGGXAXRXXEXFXXAAQXMGKGSFKYAWVLDKLKAER 318
++ VVIG V SG S G L KCGG R E F A +GKGSFKYAWVLDKLKAER
Sbjct: 8 INVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAER 67
Query: 319 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 498
ERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGI
Sbjct: 68 ERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGI 127
Query: 499 SKNGQXREHALLAFTLGVXQLIVGVNKMDSTEXXYSEPRFEEXXXXXXXXXXXXGYNPXX 678
SK+GQ REHALLA+TLGV QLIV VNKMD+T +S+ RFEE G+NP
Sbjct: 128 SKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKT 185
Query: 679 VXFVPISGWXGEXMLEPXTKMPWXKGWXVXRKEG 780
V FVP+SG+ G+ M+EP T MPW +GW K G
Sbjct: 186 VPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAG 219
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 289 bits (708), Expect = 5e-79
Identities = 140/214 (65%), Positives = 157/214 (73%)
Frame = +1
Query: 139 LHXVVIGPVXSGXSXPXGXLXSKCGGXAXRXXEXFXXAAQXMGKGSFKYAWVLDKLKAER 318
++ VVIG V SG S G L KCGG R E F A +GKGSFKYAWVLDKLKAER
Sbjct: 8 INVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAER 67
Query: 319 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 498
ERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGI
Sbjct: 68 ERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGI 127
Query: 499 SKNGQXREHALLAFTLGVXQLIVGVNKMDSTEXXYSEPRFEEXXXXXXXXXXXXGYNPXX 678
SK+GQ REHALLA+TLGV QLIV VNKMD+T +S+ RFEE G+NP
Sbjct: 128 SKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKT 185
Query: 679 VXFVPISGWXGEXMLEPXTKMPWXKGWXVXRKEG 780
V FVP+SG+ G+ M+EP T MPW +GW K G
Sbjct: 186 VPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAG 219
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 155 bits (377), Expect = 6e-39
Identities = 87/211 (41%), Positives = 112/211 (53%), Gaps = 3/211 (1%)
Frame = +1
Query: 133 PPLHXVVIGPVXSGXSXPXGXLXSKCGGXAXRXXEXFXXAAQXMGKGSFKYAWVLDKLKA 312
P +H VV G V SG S G + + G R + A GKGSF YAW+LD +
Sbjct: 176 PVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEE 235
Query: 313 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 492
ER RG+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE
Sbjct: 236 ERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFER 295
Query: 493 GISKNGQXREHALLAFTLGVXQLIVGVNKMDSTEXXYSEPRFEE-XXXXXXXXXXXXGYN 669
G +NGQ REHA L LG+ +++V VNK+D +SE RF+E G+
Sbjct: 296 GFLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFK 353
Query: 670 PXXVXFVPISGWXGEXMLEPXTK--MPWXKG 756
V FVPIS G +++ + W KG
Sbjct: 354 TSNVHFVPISAISGTNLIQKDSSDLYKWYKG 384
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 143 bits (347), Expect = 3e-35
Identities = 77/210 (36%), Positives = 114/210 (54%), Gaps = 4/210 (1%)
Frame = +1
Query: 139 LHXVVIGPVXSGXSXPXGXLXSKCGGXAXRXXEXFXXAAQXMGKGSFKYAWVLDKLKAER 318
++ V IG V +G S G + G R E A+ GK S+ +W LD ER
Sbjct: 239 VNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEER 298
Query: 319 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 498
E+G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG
Sbjct: 299 EKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGF 358
Query: 499 SKNGQXREHALLAFTLGVXQLIVGVNKMDSTEXXYSEPRFEE-XXXXXXXXXXXXGYN-P 672
+ GQ REHA+LA T G+ L+V +NKMD +SE R++E GYN
Sbjct: 359 ERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSK 418
Query: 673 XXVXFVPISGWXGEXMLE--PXTKMPWXKG 756
V ++P+S + G+ + + + PW +G
Sbjct: 419 TDVKYMPVSAYTGQNVKDRVDSSVCPWYQG 448
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 87.4 bits (207), Expect = 2e-18
Identities = 46/111 (41%), Positives = 67/111 (60%)
Frame = +1
Query: 262 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 441
+G+ SF +DK E+ RGITI A ++ET+ + +D PGH D+IKNMITG +
Sbjct: 80 LGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAAT 139
Query: 442 ADCAVLIVAAGTGEFEAGISKNGQXREHALLAFTLGVXQLIVGVNKMDSTE 594
D A+++V+A G+ Q REH LLA +GV Q++V +NK+D E
Sbjct: 140 MDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIVVYINKVDMVE 183
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 48.4 bits (110), Expect = 1e-06
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +1
Query: 292 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 471
V+D L AER+RGITI+ A F + +ID PGH DF + + D AV I+
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126
Query: 472 GTG 480
G
Sbjct: 127 SAG 129
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 44.0 bits (99), Expect = 3e-05
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +1
Query: 295 LDKLKAERERGITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 462
LDKL+ ER RGIT+ ++ + Y + +ID PGH DF ++ + + +L+
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
Query: 463 VAAGTG 480
V A G
Sbjct: 155 VDASQG 160
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 35.1 bits (77), Expect = 0.013
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +1
Query: 265 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTS 438
GK + A+ + + GIT I + F+ ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 439 QADCAVLIVAAGTG 480
AD VL+VA G
Sbjct: 243 IADIVVLVVAGDDG 256
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 34.3 bits (75), Expect = 0.023
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Frame = +1
Query: 295 LDKLKAERERGITIDIA----LWK---------------FETSKYYVTIIDAPGHRDFIK 417
+D ++ ERE+GITI A W+ FE S Y + IID PGH DF
Sbjct: 102 MDFMELEREKGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDFTI 160
Query: 418 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQXREH 525
+ D AVL++ A +G I+ + Q R +
Sbjct: 161 EVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 33.5 bits (73), Expect = 0.041
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +1
Query: 373 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQXREHALLAFTLGV 552
+V+ +D PGH + M+ G + D A+L++A Q EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 553 XQLIVGVNKMDSTEXXYSEPRFE 621
+I+ NK+D +E ++
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQ 185
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.38
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 370 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 480
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.50
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 298 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 420
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.66
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 382 IIDAPGHRDFIKNMITGTSQADCAVLIV 465
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 370 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 465
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 370 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 465
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +1
Query: 313 ERERGITID-----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 465
ERER ++I +A+ + + ID PGH DF+ + + +D VL+V
Sbjct: 185 ERERVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 359 SNFQRAISIVIPRSRSAFSLSNTQAYLKXPLPIXWAAXXNXS 234
S F IS+ +P FSL+ ++ K LPI W + + S
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRS 444
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,406,917
Number of Sequences: 5004
Number of extensions: 37253
Number of successful extensions: 93
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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