Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_L14
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 310 9e-85
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 310 9e-85
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 177 5e-64
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 231 5e-61
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 173 2e-43
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 173 2e-43
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 148 5e-36
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 82 4e-16
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 82 4e-16
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 75 5e-14
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 75 5e-14
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 75 5e-14
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 71 1e-12
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 42 8e-04
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.20
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 33 0.27
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.36
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.36
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 32 0.62
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 31 1.4
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.9
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 2.5
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 310 bits (761), Expect = 9e-85
Identities = 152/214 (71%), Positives = 161/214 (75%)
Frame = +1
Query: 139 LHXVVIGPVXSGXSXPXGXLXSKCGGXAXRXXEXFXXAAQXMGKGSFKYAWVLDKLKAER 318
++ VVIG V SG S G L KCGG R E F AQ MGKGSFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 67
Query: 319 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 498
ERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGI
Sbjct: 68 ERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGI 127
Query: 499 SKNGQXREHALLAFTLGVXQLIVGVNKMDSTEXXYSEPRFEEXXXXXXXXXXXXGYNPXX 678
SKNGQ REHALLA TLGV QLIV NKMDSTE +SE RF E GYNP
Sbjct: 128 SKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKA 187
Query: 679 VXFVPISGWXGEXMLEPXTKMPWXKGWXVXRKEG 780
V FVPISG+ G+ MLE + MPW KGW V RKEG
Sbjct: 188 VPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEG 221
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 310 bits (761), Expect = 9e-85
Identities = 152/214 (71%), Positives = 161/214 (75%)
Frame = +1
Query: 139 LHXVVIGPVXSGXSXPXGXLXSKCGGXAXRXXEXFXXAAQXMGKGSFKYAWVLDKLKAER 318
++ VVIG V SG S G L KCGG R E F AQ MGKGSFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 67
Query: 319 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 498
ERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGI
Sbjct: 68 ERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGI 127
Query: 499 SKNGQXREHALLAFTLGVXQLIVGVNKMDSTEXXYSEPRFEEXXXXXXXXXXXXGYNPXX 678
SKNGQ REHALLA TLGV QLIV NKMDSTE +SE RF E GYNP
Sbjct: 128 SKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKA 187
Query: 679 VXFVPISGWXGEXMLEPXTKMPWXKGWXVXRKEG 780
V FVPISG+ G+ MLE + MPW KGW V RKEG
Sbjct: 188 VPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEG 221
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 177 bits (432), Expect(2) = 5e-64
Identities = 85/110 (77%), Positives = 90/110 (81%)
Frame = +1
Query: 139 LHXVVIGPVXSGXSXPXGXLXSKCGGXAXRXXEXFXXAAQXMGKGSFKYAWVLDKLKAER 318
++ VVIG V SG S G L KCGG R E F AQ MGKGSFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 67
Query: 319 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 468
ERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 68 ERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 85.4 bits (202), Expect(2) = 5e-64
Identities = 40/74 (54%), Positives = 45/74 (60%)
Frame = +1
Query: 559 LIVGVNKMDSTEXXYSEPRFEEXXXXXXXXXXXXGYNPXXVXFVPISGWXGEXMLEPXTK 738
L+V NKMDSTE +SE RF E GYNP V FVPISG+ G+ MLE +
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 739 MPWXKGWXVXRKEG 780
MPW KGW V RKEG
Sbjct: 174 MPWFKGWAVERKEG 187
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 231 bits (565), Expect = 5e-61
Identities = 112/142 (78%), Positives = 118/142 (83%)
Frame = +1
Query: 139 LHXVVIGPVXSGXSXPXGXLXSKCGGXAXRXXEXFXXAAQXMGKGSFKYAWVLDKLKAER 318
++ VVIG V SG S G L KCGG R E F AQ MGKGSFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 67
Query: 319 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 498
ERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGI
Sbjct: 68 ERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGI 127
Query: 499 SKNGQXREHALLAFTLGVXQLI 564
SKNGQ REHALLA TLGV QL+
Sbjct: 128 SKNGQTREHALLAQTLGVKQLV 149
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +2
Query: 647 TSRRLXTTQXXSXSCPFLDGTEXTCWSLXPKCLGXRDGRWXVRKE 781
+SRR T Q D TE TC C G RDG RKE
Sbjct: 160 SSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKE 204
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 173 bits (420), Expect = 2e-43
Identities = 97/222 (43%), Positives = 130/222 (58%), Gaps = 2/222 (0%)
Frame = +1
Query: 97 VXRASPXXGXAXPPL-HXVVIGPVXSGXSXPXGXLXSKCGGXAXRXXEXFXXAAQXMGKG 273
V R +P A L + +V+G V +G S G L R + F A GK
Sbjct: 156 VARKTPKPRVADKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKA 215
Query: 274 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 453
SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A
Sbjct: 216 SFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAA 275
Query: 454 VLIVAAGTGEFEAGISKNGQXREHALLAFTLGVXQLIVGVNKMDSTEXXYSEPRFEE-XX 630
+L+V A TGEFE G GQ +EHALL +LGV QLIV VNK+D+ + +S+ RF+E
Sbjct: 276 ILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKN 333
Query: 631 XXXXXXXXXXGYNPXXVXFVPISGWXGEXMLEPXTKMPWXKG 756
G++ FVP+SG+ GE +++ ++ W G
Sbjct: 334 NLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWYDG 372
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 173 bits (420), Expect = 2e-43
Identities = 97/222 (43%), Positives = 130/222 (58%), Gaps = 2/222 (0%)
Frame = +1
Query: 97 VXRASPXXGXAXPPL-HXVVIGPVXSGXSXPXGXLXSKCGGXAXRXXEXFXXAAQXMGKG 273
V R +P A L + +V+G V +G S G L R + F A GK
Sbjct: 174 VARKTPKPRVADKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKA 233
Query: 274 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 453
SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A
Sbjct: 234 SFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAA 293
Query: 454 VLIVAAGTGEFEAGISKNGQXREHALLAFTLGVXQLIVGVNKMDSTEXXYSEPRFEE-XX 630
+L+V A TGEFE G GQ +EHALL +LGV QLIV VNK+D+ + +S+ RF+E
Sbjct: 294 ILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKN 351
Query: 631 XXXXXXXXXXGYNPXXVXFVPISGWXGEXMLEPXTKMPWXKG 756
G++ FVP+SG+ GE +++ ++ W G
Sbjct: 352 NLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWYDG 390
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 148 bits (359), Expect = 5e-36
Identities = 76/200 (38%), Positives = 110/200 (55%), Gaps = 1/200 (0%)
Frame = +1
Query: 139 LHXVVIGPVXSGXSXPXGXLXSKCGGXAXRXXEXFXXAAQXMGKGSFKYAWVLDKLKAER 318
++ V +G V +G S G L G R E + A+ G+ S+ +W +D ER
Sbjct: 110 INMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEER 169
Query: 319 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 498
E+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G
Sbjct: 170 EKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGF 229
Query: 499 SKNGQXREHALLAFTLGVXQLIVGVNKMDSTEXXYSEPRFEEXXXXXXXXXXXXGYNP-X 675
+ GQ REH++L T GV L++ VNKMD + E RF+E G+NP
Sbjct: 230 DRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKT 289
Query: 676 XVXFVPISGWXGEXMLEPXT 735
+ +VP SG G + + T
Sbjct: 290 DITYVPCSGLTGAFIKDRPT 309
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 82.2 bits (194), Expect = 4e-16
Identities = 45/100 (45%), Positives = 61/100 (61%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 474
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 475 TGEFEAGISKNGQXREHALLAFTLGVXQLIVGVNKMDSTE 594
G E Q +EH +LA +GV + + +NK D E
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 82.2 bits (194), Expect = 4e-16
Identities = 45/100 (45%), Positives = 61/100 (61%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 474
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 475 TGEFEAGISKNGQXREHALLAFTLGVXQLIVGVNKMDSTE 594
G E Q +EH +LA +GV + + +NK D E
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 75.4 bits (177), Expect = 5e-14
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 474
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 475 TGEFEAGISKNGQXREHALLAFTLGV--XQLIVGVNKMD 585
G Q REH LLA +GV ++V +NK+D
Sbjct: 147 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD 178
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 75.4 bits (177), Expect = 5e-14
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 474
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 475 TGEFEAGISKNGQXREHALLAFTLGV--XQLIVGVNKMD 585
G Q REH LLA +GV ++V +NK+D
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD 179
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 75.4 bits (177), Expect = 5e-14
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 474
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 475 TGEFEAGISKNGQXREHALLAFTLGV--XQLIVGVNKMD 585
G Q REH LLA +GV ++V +NK+D
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD 179
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/60 (58%), Positives = 38/60 (63%)
Frame = +1
Query: 139 LHXVVIGPVXSGXSXPXGXLXSKCGGXAXRXXEXFXXAAQXMGKGSFKYAWVLDKLKAER 318
++ VVIG V SG S G L KCGG R E F AQ MGKGSFKYAWVLDKLK +
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 50.8 bits (116), Expect = 1e-06
Identities = 34/98 (34%), Positives = 48/98 (48%)
Frame = +1
Query: 292 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 471
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 472 GTGEFEAGISKNGQXREHALLAFTLGVXQLIVGVNKMD 585
G Q + LAF + Q+I +NK+D
Sbjct: 136 NQG-------VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 41.5 bits (93), Expect = 8e-04
Identities = 37/108 (34%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +1
Query: 265 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 441
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 442 ADCAVLIVAAGTGEFEAGISKNGQXREHALLAFTLGVXQLIVGVNKMD 585
AD VL+VAA G E Q + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 292 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 471
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 472 GTG 480
G
Sbjct: 124 SAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 474
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 475 TG 480
G
Sbjct: 146 VG 147
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 36.7 bits (81), Expect = 0.022
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +1
Query: 376 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQXREHALLAFTLGVX 555
+ +ID PGH I+ ++ ++ D A++I+ + AGI Q EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 556 QLIVGVNKMDSTE 594
++I+ +NK D E
Sbjct: 127 RVIIVLNKCDLAE 139
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 465
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 295 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 465
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/84 (23%), Positives = 36/84 (42%)
Frame = +1
Query: 373 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQXREHALLAFTLGV 552
+V+ +D PGH + M+ G + D A L+VA Q EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 553 XQLIVGVNKMDSTEXXYSEPRFEE 624
L++ NK+D + + +E+
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQ 205
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 298 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 462
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 463 VAAGTG 480
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 298 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 462
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 463 VAAGTG 480
V A G
Sbjct: 107 VDAHEG 112
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -2
Query: 578 LFTPTMSCXTPRVKASKACSRX*PFLEIPASNSPVPAATMSTA 450
LF PT+SC + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +1
Query: 382 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQXREHALLAFTLGVXQL 561
IID PGH F G+S D A+L+V + G+ Q E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 562 IVGVNKMDSTEXXYSEPR 615
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 331 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 480
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 331 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 480
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,543,605
Number of Sequences: 27780
Number of extensions: 217879
Number of successful extensions: 438
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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