Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_L13
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0549 - 4051257-4051709,4051967-4052075,4053194-4053252,405...    28   8.3  

>01_01_0549 -
           4051257-4051709,4051967-4052075,4053194-4053252,
           4053339-4053445,4053711-4053867,4054110-4054169,
           4055396-4055524,4056027-4056074,4057148-4057214,
           4057948-4058006
          Length = 415

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 471 LCATRNGDRIALFIAEGGPECFQXKTENL 557
           +CA+  G R+AL+  E GPE  + +  +L
Sbjct: 288 ICASIIGQRLALYALEAGPEWIRERVRDL 316


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,805,595
Number of Sequences: 37544
Number of extensions: 220170
Number of successful extensions: 402
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)