Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_L12
         (870 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060656-1|AAL28204.1|   81|Drosophila melanogaster GH08548p pro...    62   1e-09
AF069530-1|AAC42662.1|   81|Drosophila melanogaster 9 kD basic p...    62   1e-09
AE014297-1843|AAF55049.1|   81|Drosophila melanogaster CG3321-PB...    62   1e-09
AE014297-1842|AAG22153.1|   81|Drosophila melanogaster CG3321-PA...    62   1e-09

>AY060656-1|AAL28204.1|   81|Drosophila melanogaster GH08548p
           protein.
          Length = 81

 Score = 62.1 bits (144), Expect = 1e-09
 Identities = 33/68 (48%), Positives = 37/68 (54%)
 Frame = +1

Query: 163 APVRXSPLIXFGRWSFLTVGVLYGAFHQXXLSKXXAXLRXXXAXXXVXRXAXLKXXXXXA 342
           APVR SPLI FGRWS L VG+ YGA HQ  LSK    LR   A     R A L      +
Sbjct: 4   APVRVSPLIKFGRWSLLLVGIAYGAAHQSRLSKKEEKLREIEAQQKAVRDAKLAEEKKRS 63

Query: 343 SALEIKAL 366
           +  E +AL
Sbjct: 64  AEAEARAL 71


>AF069530-1|AAC42662.1|   81|Drosophila melanogaster 9 kD basic
           protein protein.
          Length = 81

 Score = 62.1 bits (144), Expect = 1e-09
 Identities = 33/68 (48%), Positives = 37/68 (54%)
 Frame = +1

Query: 163 APVRXSPLIXFGRWSFLTVGVLYGAFHQXXLSKXXAXLRXXXAXXXVXRXAXLKXXXXXA 342
           APVR SPLI FGRWS L VG+ YGA HQ  LSK    LR   A     R A L      +
Sbjct: 4   APVRVSPLIKFGRWSLLLVGIAYGAAHQSRLSKKEEKLREIEAQQKAVRDAKLAEEKKRS 63

Query: 343 SALEIKAL 366
           +  E +AL
Sbjct: 64  AEAEARAL 71


>AE014297-1843|AAF55049.1|   81|Drosophila melanogaster CG3321-PB,
           isoform B protein.
          Length = 81

 Score = 62.1 bits (144), Expect = 1e-09
 Identities = 33/68 (48%), Positives = 37/68 (54%)
 Frame = +1

Query: 163 APVRXSPLIXFGRWSFLTVGVLYGAFHQXXLSKXXAXLRXXXAXXXVXRXAXLKXXXXXA 342
           APVR SPLI FGRWS L VG+ YGA HQ  LSK    LR   A     R A L      +
Sbjct: 4   APVRVSPLIKFGRWSLLLVGIAYGAAHQSRLSKKEEKLREIEAQQKAVRDAKLAEEKKRS 63

Query: 343 SALEIKAL 366
           +  E +AL
Sbjct: 64  AEAEARAL 71


>AE014297-1842|AAG22153.1|   81|Drosophila melanogaster CG3321-PA,
           isoform A protein.
          Length = 81

 Score = 62.1 bits (144), Expect = 1e-09
 Identities = 33/68 (48%), Positives = 37/68 (54%)
 Frame = +1

Query: 163 APVRXSPLIXFGRWSFLTVGVLYGAFHQXXLSKXXAXLRXXXAXXXVXRXAXLKXXXXXA 342
           APVR SPLI FGRWS L VG+ YGA HQ  LSK    LR   A     R A L      +
Sbjct: 4   APVRVSPLIKFGRWSLLLVGIAYGAAHQSRLSKKEEKLREIEAQQKAVRDAKLAEEKKRS 63

Query: 343 SALEIKAL 366
           +  E +AL
Sbjct: 64  AEAEARAL 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,046,871
Number of Sequences: 53049
Number of extensions: 63520
Number of successful extensions: 79
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)