Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_K19
         (850 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22176-1|CAA80142.1|  724|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z70686-10|CAD21656.1|  533|Caenorhabditis elegans Hypothetical p...    28   7.3  
Z70683-8|CAD21626.1|  533|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AF016416-4|AAB65273.2|  150|Caenorhabditis elegans Hypothetical ...    28   7.3  

>Z22176-1|CAA80142.1|  724|Caenorhabditis elegans Hypothetical
           protein ZK1098.1 protein.
          Length = 724

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -3

Query: 200 EKRQKXLXXFDERSGNRWRFEXRXGATESEGKKPRXKQDKXQGRXXKKRTGKSX*EGPSR 21
           +K++K     ++RS N    E      E + KK   K+D+       K++ KS    PSR
Sbjct: 646 KKKKKDKKKKNKRSDNNSESEGEIREKEKKKKKKHSKEDRMDDEERGKKSKKSRKRSPSR 705


>Z70686-10|CAD21656.1|  533|Caenorhabditis elegans Hypothetical
           protein F13B12.6 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = -3

Query: 428 KIFGIIEQLEQRDGFFPHFFV-KDRE-FQILGKESDLVHHHEIF--VGFH 291
           +I+G       RDG F HF V K +E +Q LG  ++ V H E+F  V +H
Sbjct: 424 RIWGYTVSYASRDGSFKHFLVEKIKEGYQFLG--TNQVVHDELFDLVAYH 471


>Z70683-8|CAD21626.1|  533|Caenorhabditis elegans Hypothetical
           protein F13B12.6 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = -3

Query: 428 KIFGIIEQLEQRDGFFPHFFV-KDRE-FQILGKESDLVHHHEIF--VGFH 291
           +I+G       RDG F HF V K +E +Q LG  ++ V H E+F  V +H
Sbjct: 424 RIWGYTVSYASRDGSFKHFLVEKIKEGYQFLG--TNQVVHDELFDLVAYH 471


>AF016416-4|AAB65273.2|  150|Caenorhabditis elegans Hypothetical
           protein F29A7.3 protein.
          Length = 150

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -2

Query: 558 FVWSQVERXXRCQSXG*XLCSRRIRTFPGSCRLWRSXLFXRNIQNLWHNRT 406
           F+W+ VE+  R  S G  L + R+ T   SC+L  + L       ++ N T
Sbjct: 79  FLWNSVEKVKRNDSGGEGLTAFRVFTEQPSCKLNVALLLNGKKYQIYSNDT 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,563,725
Number of Sequences: 27780
Number of extensions: 207298
Number of successful extensions: 524
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)