Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_K13
(864 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 48 1e-05
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 48 1e-05
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 47 2e-05
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 47 2e-05
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 38 0.007
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 38 0.007
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/146 (20%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
Frame = +2
Query: 401 LTVANKIYVSDQYKLXDAF-SRTANLFRSEVDNINFSAPKNAXDIIXRWADEQTQGXIKT 577
+ VAN I+ + + + + L+ + +NF + + + I + E T+G IK
Sbjct: 93 VNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKK 152
Query: 578 PVXEDXIXPXTXVAMFNVIFFQGXWXVPFXASEXEEKDFXSMKKXSSRNRXCVS*SHCFX 757
+ D I + N +F+ W F +++F S + S R + +
Sbjct: 153 IINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREFFS-SENSKRETEFLHSRNSNR 211
Query: 758 LXTKNWAXR*SXLPYKEPGFRMVVVL 835
++N + LPYK+ F + + L
Sbjct: 212 KYSENGQFQVLSLPYKDTSFALSIFL 237
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/146 (20%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
Frame = +2
Query: 401 LTVANKIYVSDQYKLXDAF-SRTANLFRSEVDNINFSAPKNAXDIIXRWADEQTQGXIKT 577
+ VAN I+ + + + + L+ + +NF + + + I + E T+G IK
Sbjct: 93 VNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKK 152
Query: 578 PVXEDXIXPXTXVAMFNVIFFQGXWXVPFXASEXEEKDFXSMKKXSSRNRXCVS*SHCFX 757
+ D I + N +F+ W F +++F S + S R + +
Sbjct: 153 IINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREFFS-SENSKRETEFLHSRNSNR 211
Query: 758 LXTKNWAXR*SXLPYKEPGFRMVVVL 835
++N + LPYK+ F + + L
Sbjct: 212 KYSENGQFQVLSLPYKDTSFALSIFL 237
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
Frame = +2
Query: 290 HSPRXXXREILGGGEAQESTHTYGLLNQRY-AEFDPKFLTVANKIYVSDQYKLXDAFS-R 463
H+ ++ G ++ + +N+ + + +AN+++VS + + AF+
Sbjct: 52 HTRHDIRNSVVNGSTDEQFIEHFSFINKLLNSSVNDVETLIANRLFVSPEQAIRKAFTDE 111
Query: 464 TANLFRSEVDNINFSAPKNAXDIIXRWADEQTQGXIKTPVXEDXIXPXTXVAMFNVIFFQ 643
+ +E I+F + A I+ ++ E T+G I + D + + + N IFFQ
Sbjct: 112 LREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVDAI-LINAIFFQ 170
Query: 644 GXWXVPFXASEXEEKDF 694
G W F E E +F
Sbjct: 171 GDWRRKF--GEPAESNF 185
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
Frame = +2
Query: 290 HSPRXXXREILGGGEAQESTHTYGLLNQRY-AEFDPKFLTVANKIYVSDQYKLXDAFS-R 463
H+ ++ G ++ + +N+ + + +AN+++VS + + AF+
Sbjct: 52 HTRHDIRNSVVNGSTDEQFIEHFSFINKLLNSSVNDVETLIANRLFVSPEQAIRKAFTDE 111
Query: 464 TANLFRSEVDNINFSAPKNAXDIIXRWADEQTQGXIKTPVXEDXIXPXTXVAMFNVIFFQ 643
+ +E I+F + A I+ ++ E T+G I + D + + + N IFFQ
Sbjct: 112 LREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVDAI-LINAIFFQ 170
Query: 644 GXWXVPFXASEXEEKDF 694
G W F E E +F
Sbjct: 171 GDWRRKF--GEPAESNF 185
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +2
Query: 407 VANKIYVSDQYKLXDAFSRTA-NLFRSEVDNINFSAPKNAXDIIXRWADEQTQGXIKTPV 583
+ANK+Y+ + + F TA + ++ +++ + P A I + + T G IK
Sbjct: 85 LANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTPA-AVQEINSFVNTATNGKIKNIA 143
Query: 584 XEDXIXPXTXVAMFNVIFFQGXWXVPFXASEXEEKDF 694
+D I + + N I+F+ W F E+DF
Sbjct: 144 TQDSIKDAIAL-LINSIYFKADWDDKFDGMSVSEQDF 179
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +2
Query: 407 VANKIYVSDQYKLXDAFSRTA-NLFRSEVDNINFSAPKNAXDIIXRWADEQTQGXIKTPV 583
+ANK+Y+ + + F TA + ++ +++ + P A I + + T G IK
Sbjct: 85 LANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTPA-AVQEINSFVNTATNGKIKNIA 143
Query: 584 XEDXIXPXTXVAMFNVIFFQGXWXVPFXASEXEEKDF 694
+D I + + N I+F+ W F E+DF
Sbjct: 144 TQDSIKDAIAL-LINSIYFKADWDDKFDGMSVSEQDF 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,607,909
Number of Sequences: 27780
Number of extensions: 208612
Number of successful extensions: 436
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -