Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_K08
         (844 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061382-1|AAL28930.1|  262|Drosophila melanogaster LD30683p pro...   101   2e-21
AE014134-1829|AAF52905.1|  262|Drosophila melanogaster CG4968-PA...   101   2e-21

>AY061382-1|AAL28930.1|  262|Drosophila melanogaster LD30683p
           protein.
          Length = 262

 Score =  101 bits (241), Expect = 2e-21
 Identities = 61/142 (42%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
 Frame = +2

Query: 263 VXXLSSKXXXXXRXRPDGXCFFRAFSYAXLXRLLTXXXXXXXFYXXAXXSKXXLVALGFS 442
           +  LS K     R RPDG CFFRAF+Y+ L  L++       F   A  SK  LV LGF 
Sbjct: 56  IQDLSKKYKFIRRTRPDGNCFFRAFAYSYLEYLISNTSAYQEFKKLAEESKEKLVQLGFP 115

Query: 443 XFXVXXFYEXFMXVXQXVG-XXAGSTPXLXXXVRMXLXXXFXXXGXSDYIVVYLRLIXSG 619
            F +  F+E FM V Q V    AG        V+  L   F   G SDY+VVYLRLI SG
Sbjct: 116 SFTLEDFHETFMEVIQRVSPDNAGG----HSTVQDELHKIFNEQGYSDYVVVYLRLITSG 171

Query: 620 QLQXXQXFYXXFIEGPXXVMSF 685
           +LQ    FY  FIEG   + +F
Sbjct: 172 KLQEEADFYQNFIEGDLTIEAF 193



 Score = 30.3 bits (65), Expect = 3.5
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +1

Query: 697 VDPMXXEXXHIHIXXLSXALKVCVXXXYMXXGXG 798
           V+PM  E  HIHI  L  AL   V   Y+  G G
Sbjct: 198 VEPMYKESDHIHIIALCTALGAGVRVEYLDRGEG 231


>AE014134-1829|AAF52905.1|  262|Drosophila melanogaster CG4968-PA
           protein.
          Length = 262

 Score =  101 bits (241), Expect = 2e-21
 Identities = 61/142 (42%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
 Frame = +2

Query: 263 VXXLSSKXXXXXRXRPDGXCFFRAFSYAXLXRLLTXXXXXXXFYXXAXXSKXXLVALGFS 442
           +  LS K     R RPDG CFFRAF+Y+ L  L++       F   A  SK  LV LGF 
Sbjct: 56  IQDLSKKYKFIRRTRPDGNCFFRAFAYSYLEYLISNTSAYQEFKKLAEESKEKLVQLGFP 115

Query: 443 XFXVXXFYEXFMXVXQXVG-XXAGSTPXLXXXVRMXLXXXFXXXGXSDYIVVYLRLIXSG 619
            F +  F+E FM V Q V    AG        V+  L   F   G SDY+VVYLRLI SG
Sbjct: 116 SFTLEDFHETFMEVIQRVSPDNAGG----HSTVQDELHKIFNEQGYSDYVVVYLRLITSG 171

Query: 620 QLQXXQXFYXXFIEGPXXVMSF 685
           +LQ    FY  FIEG   + +F
Sbjct: 172 KLQEEADFYQNFIEGDLTIEAF 193



 Score = 30.3 bits (65), Expect = 3.5
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +1

Query: 697 VDPMXXEXXHIHIXXLSXALKVCVXXXYMXXGXG 798
           V+PM  E  HIHI  L  AL   V   Y+  G G
Sbjct: 198 VEPMYKESDHIHIIALCTALGAGVRVEYLDRGEG 231


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,203,163
Number of Sequences: 53049
Number of extensions: 130679
Number of successful extensions: 53
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)