Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_K05
         (894 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   147   1e-35
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    58   8e-09

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  147 bits (356), Expect = 1e-35
 Identities = 72/146 (49%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
 Frame = +1

Query: 169 FFLVQXXGVXXGLVGTXXXRLEKQGFKLXGLKFVWPSXALXQXXXXDLXSRTFFPGLVKY 348
           F  ++  GV  GLVG    R E++G+KL  LK +  S A  +    DL  + FFP L++Y
Sbjct: 8   FIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSLIEY 67

Query: 349 MSXGPVVPMVWEGLNVVKTGRQXXGAXXPXDSQPGTIRGDLWIQVGRNIIHGSDSVESXK 528
           MS GPVV MVW+GL+VVK GR   GA  P  S PGTIRGD  IQ GRNI HGSD+V+S  
Sbjct: 68  MSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVDSAN 127

Query: 529 KEIGLWFTDKEVVGW-TPANEKWVYE 603
           +EI  WF  +E+  + +P    WVYE
Sbjct: 128 REIAHWFKQEEINDYASPFINSWVYE 153


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 58.0 bits (134), Expect = 8e-09
 Identities = 33/79 (41%), Positives = 43/79 (54%)
 Frame = +1

Query: 319 RTFFPGLVKYMSXGPVVPMVWEGLNVVKTGRQXXGAXXPXDSQPGTIRGDLWIQVGRNII 498
           + FFP L+ YMS GPVV M+WEG +VVK  R   G       +  +I  DL ++      
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGC 91

Query: 499 HGSDSVESXKKEIGLWFTD 555
           H SDSV S  +E  LWF +
Sbjct: 92  HCSDSVASANREYVLWFEE 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,518,027
Number of Sequences: 27780
Number of extensions: 159492
Number of successful extensions: 270
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)