Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_K04
         (870 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   2.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.4  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   8.5  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   8.5  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   8.5  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   8.5  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   8.5  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   8.5  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   8.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   8.5  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +2

Query: 341 RKSDQVEILTNKNFEKKLYGQNNALLVQ--FYNS 436
           + SDQ E LT K  + K+YG   + +    +YNS
Sbjct: 235 KMSDQQENLTLKEVDNKVYGMALSPVTHNLYYNS 268


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 295  SRNESYQKYFKNRRIPEIH 239
            SRN++YQK  +N  I EI+
Sbjct: 1539 SRNKAYQKVEENEIIFEIY 1557


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 301 NCSRNESYQKYFKNRRIPEIH 239
           +CSR+ + +   KNRR  ++H
Sbjct: 3   SCSRDRNREYREKNRRYEKLH 23


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 301 NCSRNESYQKYFKNRRIPEIH 239
           +CSR+ + +   KNRR  ++H
Sbjct: 3   SCSRDRNREYREKNRRYEKLH 23


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 301 NCSRNESYQKYFKNRRIPEIH 239
           +CSR+ + +   KNRR  ++H
Sbjct: 3   SCSRDRNREYREKNRRYEKLH 23


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 301 NCSRNESYQKYFKNRRIPEIH 239
           +CSR+ + +   KNRR  ++H
Sbjct: 3   SCSRDRNREYREKNRRYEKLH 23


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 301 NCSRNESYQKYFKNRRIPEIH 239
           +CSR+ + +   KNRR  ++H
Sbjct: 3   SCSRDRNREYREKNRRYEKLH 23


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 301 NCSRNESYQKYFKNRRIPEIH 239
           +CSR+ + +   KNRR  ++H
Sbjct: 3   SCSRDRNREYREKNRRYEKLH 23


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 301 NCSRNESYQKYFKNRRIPEIH 239
           +CSR+ + +   KNRR  ++H
Sbjct: 3   SCSRDRNREYREKNRRYEKLH 23


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 192 YKLLDFSQNLFRVK 233
           Y L DF  N+F+VK
Sbjct: 22  YSLRDFKANIFQVK 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,598
Number of Sequences: 438
Number of extensions: 3803
Number of successful extensions: 32
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)