Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_K03
(937 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 36 0.16
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 35 0.37
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 35 0.37
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 35 0.37
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 34 0.85
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 34 0.85
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 34 0.85
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 34 0.85
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 34 0.85
AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein. 31 4.6
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein. 31 4.6
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein. 31 4.6
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein. 31 4.6
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 31 6.0
AL110210-1|CAB53676.1| 990|Homo sapiens hypothetical protein pr... 31 6.0
AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2 p... 31 8.0
AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein. 31 8.0
AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein. 31 8.0
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 36.3 bits (80), Expect = 0.16
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPPFSXXRQXGAP 845
PP GPPP PP P S PP R GAP
Sbjct: 279 PPPPSRGGPPPPPPPPHSSGPPPPPARGRGAP 310
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 35.1 bits (77), Expect = 0.37
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPPFSXXRQXGAP 845
PP GPPP PP P + PP R GAP
Sbjct: 279 PPPPSRGGPPPPPPPPHNSGPPPPPARGRGAP 310
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 35.1 bits (77), Expect = 0.37
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPPFSXXRQXGAP 845
PP GPPP PP P + PP R GAP
Sbjct: 279 PPPPSRGGPPPPPPPPHNSGPPPPPARGRGAP 310
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 35.1 bits (77), Expect = 0.37
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPPFSXXRQXGAP 845
PP GPPP PP P + PP R GAP
Sbjct: 279 PPPPSRGGPPPPPPPPHNSGPPPPPARGRGAP 310
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.85
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPP 815
PP P GPPP PP P PP
Sbjct: 297 PPPVPGYGPPPGPPPPQQGPPP 318
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.85
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPP 815
PP P GPPP PP P PP
Sbjct: 297 PPPVPGYGPPPGPPPPQQGPPP 318
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 33.9 bits (74), Expect = 0.85
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPP 815
PP P GPPP PP P PP
Sbjct: 224 PPPVPGYGPPPGPPPPQQGPPP 245
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 33.9 bits (74), Expect = 0.85
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPP 815
PP P GPPP PP P PP
Sbjct: 334 PPPVPGYGPPPGPPPPQQGPPP 355
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.85
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPP 815
PP P GPPP PP P PP
Sbjct: 297 PPPVPGYGPPPGPPPPQQGPPP 318
>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.5 bits (68), Expect = 4.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPPFSXXRQXGAP 845
PP P G PP PP P + PP + G P
Sbjct: 1264 PPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIP 1295
>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.5 bits (68), Expect = 4.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPPFSXXRQXGAP 845
PP P G PP PP P + PP + G P
Sbjct: 1264 PPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIP 1295
>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.5 bits (68), Expect = 4.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPPFSXXRQXGAP 845
PP P G PP PP P + PP + G P
Sbjct: 1264 PPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIP 1295
>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.5 bits (68), Expect = 4.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPPFSXXRQXGAP 845
PP P G PP PP P + PP + G P
Sbjct: 1264 PPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIP 1295
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 31.1 bits (67), Expect = 6.0
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 741 LXXPPXCPXXGPPPXPPXPXSXXPP 815
L PP P PPP PP P PP
Sbjct: 1990 LQAPPPTPPPPPPPPPPPPPPPPPP 2014
Score = 31.1 bits (67), Expect = 6.0
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPPFSXXRQXGAP 845
PP P PPP PP P PP S Q P
Sbjct: 1994 PPTPPPPPPPPPPPPPPPPPPPPSAPPQVQLP 2025
>AL110210-1|CAB53676.1| 990|Homo sapiens hypothetical protein
protein.
Length = 990
Score = 31.1 bits (67), Expect = 6.0
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPP 815
PP P GP P PP P + PP
Sbjct: 440 PPPAPSPGPGPVPPRPPAAEPP 461
>AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2
protein.
Length = 2715
Score = 30.7 bits (66), Expect = 8.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPPFSXXRQXGAP 845
PP CP PP PP S PP + Q +P
Sbjct: 426 PPLCPPPPPPVSPPPLPSPPPPPAQEEQEESP 457
>AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein.
Length = 2605
Score = 30.7 bits (66), Expect = 8.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPPFSXXRQXGAP 845
PP CP PP PP S PP + Q +P
Sbjct: 316 PPLCPPPPPPVSPPPLPSPPPPPAQEEQEESP 347
>AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein.
Length = 2415
Score = 30.7 bits (66), Expect = 8.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 750 PPXCPXXGPPPXPPXPXSXXPPFSXXRQXGAP 845
PP CP PP PP S PP + Q +P
Sbjct: 126 PPLCPPPPPPVSPPPLPSPPPPPAQEEQEESP 157
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,969,930
Number of Sequences: 237096
Number of extensions: 889088
Number of successful extensions: 10437
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8313
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12270013262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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