Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_J23
(872 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6 prot... 194 5e-49
M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6 prot... 194 5e-49
BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6 pr... 194 5e-49
BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6 pr... 194 5e-49
BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6 pr... 194 5e-49
BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6 pr... 194 5e-49
BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein. 194 5e-49
BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6 pr... 194 5e-49
AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6 pr... 194 5e-49
AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6 pr... 194 5e-49
AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6 pr... 194 5e-49
BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6 pr... 192 1e-48
M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein. 191 2e-48
J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein. 188 2e-47
AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein. 131 3e-30
BC052613-1|AAH52613.1| 99|Homo sapiens LOC728131 protein protein. 83 1e-15
AL391834-7|CAM21144.1| 91|Homo sapiens ribosomal protein S6 pr... 71 4e-12
>X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 194 bits (472), Expect = 5e-49
Identities = 98/120 (81%), Positives = 107/120 (89%)
Frame = +3
Query: 300 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 479
VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 67 VLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD 126
Query: 480 GNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 659
VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKIQRLVTP
Sbjct: 127 TTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQRLVTP 182
Score = 111 bits (268), Expect = 2e-24
Identities = 49/66 (74%), Positives = 54/66 (81%)
Frame = +2
Query: 101 MXLNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWKGYVLRVAGGNDKQG 280
M LN+S+PATGCQ L EV D KLR FYEKRM EV AD LG EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 281 FPMKQG 298
FPMKQG
Sbjct: 61 FPMKQG 66
Score = 35.1 bits (77), Expect = 0.33
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 704 KRLAKRKSSXAEYAKLLAQRKKESXVRRQXXI 799
+R K K AEYAKLLA+R KE+ +RQ I
Sbjct: 197 QRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 194 bits (472), Expect = 5e-49
Identities = 98/120 (81%), Positives = 107/120 (89%)
Frame = +3
Query: 300 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 479
VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 67 VLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD 126
Query: 480 GNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 659
VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKIQRLVTP
Sbjct: 127 TTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQRLVTP 182
Score = 111 bits (268), Expect = 2e-24
Identities = 49/66 (74%), Positives = 54/66 (81%)
Frame = +2
Query: 101 MXLNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWKGYVLRVAGGNDKQG 280
M LN+S+PATGCQ L EV D KLR FYEKRM EV AD LG EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 281 FPMKQG 298
FPMKQG
Sbjct: 61 FPMKQG 66
Score = 35.1 bits (77), Expect = 0.33
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 704 KRLAKRKSSXAEYAKLLAQRKKESXVRRQXXI 799
+R K K AEYAKLLA+R KE+ +RQ I
Sbjct: 197 QRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 194 bits (472), Expect = 5e-49
Identities = 98/120 (81%), Positives = 107/120 (89%)
Frame = +3
Query: 300 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 479
VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 67 VLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD 126
Query: 480 GNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 659
VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKIQRLVTP
Sbjct: 127 TTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQRLVTP 182
Score = 111 bits (268), Expect = 2e-24
Identities = 49/66 (74%), Positives = 54/66 (81%)
Frame = +2
Query: 101 MXLNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWKGYVLRVAGGNDKQG 280
M LN+S+PATGCQ L EV D KLR FYEKRM EV AD LG EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 281 FPMKQG 298
FPMKQG
Sbjct: 61 FPMKQG 66
Score = 35.1 bits (77), Expect = 0.33
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 704 KRLAKRKSSXAEYAKLLAQRKKESXVRRQXXI 799
+R K K AEYAKLLA+R KE+ +RQ I
Sbjct: 197 QRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 194 bits (472), Expect = 5e-49
Identities = 98/120 (81%), Positives = 107/120 (89%)
Frame = +3
Query: 300 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 479
VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 67 VLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD 126
Query: 480 GNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 659
VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKIQRLVTP
Sbjct: 127 TTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQRLVTP 182
Score = 111 bits (268), Expect = 2e-24
Identities = 49/66 (74%), Positives = 54/66 (81%)
Frame = +2
Query: 101 MXLNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWKGYVLRVAGGNDKQG 280
M LN+S+PATGCQ L EV D KLR FYEKRM EV AD LG EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 281 FPMKQG 298
FPMKQG
Sbjct: 61 FPMKQG 66
Score = 35.1 bits (77), Expect = 0.33
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 704 KRLAKRKSSXAEYAKLLAQRKKESXVRRQXXI 799
+R K K AEYAKLLA+R KE+ +RQ I
Sbjct: 197 QRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 194 bits (472), Expect = 5e-49
Identities = 98/120 (81%), Positives = 107/120 (89%)
Frame = +3
Query: 300 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 479
VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 67 VLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD 126
Query: 480 GNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 659
VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKIQRLVTP
Sbjct: 127 TTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQRLVTP 182
Score = 111 bits (268), Expect = 2e-24
Identities = 49/66 (74%), Positives = 54/66 (81%)
Frame = +2
Query: 101 MXLNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWKGYVLRVAGGNDKQG 280
M LN+S+PATGCQ L EV D KLR FYEKRM EV AD LG EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 281 FPMKQG 298
FPMKQG
Sbjct: 61 FPMKQG 66
Score = 35.1 bits (77), Expect = 0.33
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 704 KRLAKRKSSXAEYAKLLAQRKKESXVRRQXXI 799
+R K K AEYAKLLA+R KE+ +RQ I
Sbjct: 197 QRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 194 bits (472), Expect = 5e-49
Identities = 98/120 (81%), Positives = 107/120 (89%)
Frame = +3
Query: 300 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 479
VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 67 VLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD 126
Query: 480 GNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 659
VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKIQRLVTP
Sbjct: 127 TTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQRLVTP 182
Score = 111 bits (268), Expect = 2e-24
Identities = 49/66 (74%), Positives = 54/66 (81%)
Frame = +2
Query: 101 MXLNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWKGYVLRVAGGNDKQG 280
M LN+S+PATGCQ L EV D KLR FYEKRM EV AD LG EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 281 FPMKQG 298
FPMKQG
Sbjct: 61 FPMKQG 66
Score = 35.1 bits (77), Expect = 0.33
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 704 KRLAKRKSSXAEYAKLLAQRKKESXVRRQXXI 799
+R K K AEYAKLLA+R KE+ +RQ I
Sbjct: 197 QRTKKNKEEAAEYAKLLAKRMKEAREKRQEQI 228
>BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein.
Length = 247
Score = 194 bits (472), Expect = 5e-49
Identities = 98/120 (81%), Positives = 107/120 (89%)
Frame = +3
Query: 300 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 479
VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 65 VLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD 124
Query: 480 GNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 659
VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKIQRLVTP
Sbjct: 125 TTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQRLVTP 180
Score = 110 bits (264), Expect = 7e-24
Identities = 48/64 (75%), Positives = 53/64 (82%)
Frame = +2
Query: 107 LNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWKGYVLRVAGGNDKQGFP 286
LN+S+PATGCQ L EV D KLR FYEKRM EV AD LG EWKGYV+R++GGNDKQGFP
Sbjct: 1 LNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFP 60
Query: 287 MKQG 298
MKQG
Sbjct: 61 MKQG 64
Score = 35.1 bits (77), Expect = 0.33
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 704 KRLAKRKSSXAEYAKLLAQRKKESXVRRQXXI 799
+R K K AEYAKLLA+R KE+ +RQ I
Sbjct: 195 QRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 226
>BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 194 bits (472), Expect = 5e-49
Identities = 98/120 (81%), Positives = 107/120 (89%)
Frame = +3
Query: 300 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 479
VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 67 VLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD 126
Query: 480 GNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 659
VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKIQRLVTP
Sbjct: 127 TTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQRLVTP 182
Score = 111 bits (268), Expect = 2e-24
Identities = 49/66 (74%), Positives = 54/66 (81%)
Frame = +2
Query: 101 MXLNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWKGYVLRVAGGNDKQG 280
M LN+S+PATGCQ L EV D KLR FYEKRM EV AD LG EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 281 FPMKQG 298
FPMKQG
Sbjct: 61 FPMKQG 66
Score = 35.1 bits (77), Expect = 0.33
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 704 KRLAKRKSSXAEYAKLLAQRKKESXVRRQXXI 799
+R K K AEYAKLLA+R KE+ +RQ I
Sbjct: 197 QRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 194 bits (472), Expect = 5e-49
Identities = 98/120 (81%), Positives = 107/120 (89%)
Frame = +3
Query: 300 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 479
VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 67 VLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD 126
Query: 480 GNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 659
VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKIQRLVTP
Sbjct: 127 TTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQRLVTP 182
Score = 111 bits (268), Expect = 2e-24
Identities = 49/66 (74%), Positives = 54/66 (81%)
Frame = +2
Query: 101 MXLNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWKGYVLRVAGGNDKQG 280
M LN+S+PATGCQ L EV D KLR FYEKRM EV AD LG EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 281 FPMKQG 298
FPMKQG
Sbjct: 61 FPMKQG 66
Score = 35.1 bits (77), Expect = 0.33
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 704 KRLAKRKSSXAEYAKLLAQRKKESXVRRQXXI 799
+R K K AEYAKLLA+R KE+ +RQ I
Sbjct: 197 QRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6
protein.
Length = 218
Score = 194 bits (472), Expect = 5e-49
Identities = 98/120 (81%), Positives = 107/120 (89%)
Frame = +3
Query: 300 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 479
VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 36 VLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD 95
Query: 480 GNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 659
VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKIQRLVTP
Sbjct: 96 TTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQRLVTP 151
Score = 65.7 bits (153), Expect = 2e-10
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = +2
Query: 194 MGAEVEADQLGXEWKGYVLRVAGGNDKQGFPMKQG 298
M EV AD LG EWKGYV+R++GGNDKQGFPMKQG
Sbjct: 1 MATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG 35
Score = 35.1 bits (77), Expect = 0.33
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 704 KRLAKRKSSXAEYAKLLAQRKKESXVRRQXXI 799
+R K K AEYAKLLA+R KE+ +RQ I
Sbjct: 166 QRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 197
>AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 194 bits (472), Expect = 5e-49
Identities = 98/120 (81%), Positives = 107/120 (89%)
Frame = +3
Query: 300 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 479
VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 67 VLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD 126
Query: 480 GNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 659
VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKIQRLVTP
Sbjct: 127 TTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQRLVTP 182
Score = 111 bits (268), Expect = 2e-24
Identities = 49/66 (74%), Positives = 54/66 (81%)
Frame = +2
Query: 101 MXLNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWKGYVLRVAGGNDKQG 280
M LN+S+PATGCQ L EV D KLR FYEKRM EV AD LG EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 281 FPMKQG 298
FPMKQG
Sbjct: 61 FPMKQG 66
Score = 35.1 bits (77), Expect = 0.33
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 704 KRLAKRKSSXAEYAKLLAQRKKESXVRRQXXI 799
+R K K AEYAKLLA+R KE+ +RQ I
Sbjct: 197 QRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 192 bits (469), Expect = 1e-48
Identities = 97/120 (80%), Positives = 107/120 (89%)
Frame = +3
Query: 300 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 479
VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 67 VLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD 126
Query: 480 GNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 659
VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR +APKIQRLVTP
Sbjct: 127 TTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTRAPKIQRLVTP 182
Score = 111 bits (268), Expect = 2e-24
Identities = 49/66 (74%), Positives = 54/66 (81%)
Frame = +2
Query: 101 MXLNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWKGYVLRVAGGNDKQG 280
M LN+S+PATGCQ L EV D KLR FYEKRM EV AD LG EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 281 FPMKQG 298
FPMKQG
Sbjct: 61 FPMKQG 66
Score = 35.1 bits (77), Expect = 0.33
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 704 KRLAKRKSSXAEYAKLLAQRKKESXVRRQXXI 799
+R K K AEYAKLLA+R KE+ +RQ I
Sbjct: 197 QRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 191 bits (466), Expect = 2e-48
Identities = 97/120 (80%), Positives = 106/120 (88%)
Frame = +3
Query: 300 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 479
VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 67 VLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD 126
Query: 480 GNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 659
VPRRLGPKRAS+IRK FNLSKEDDVR+YVV++ L KEGK KPR KAPKIQRLVTP
Sbjct: 127 TTVPRRLGPKRASRIRKRFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQRLVTP 182
Score = 109 bits (262), Expect = 1e-23
Identities = 48/66 (72%), Positives = 53/66 (80%)
Frame = +2
Query: 101 MXLNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWKGYVLRVAGGNDKQG 280
M LN+S+PATGCQ L EV D LR FYEKRM EV AD LG EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERTLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 281 FPMKQG 298
FPMKQG
Sbjct: 61 FPMKQG 66
Score = 35.1 bits (77), Expect = 0.33
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 704 KRLAKRKSSXAEYAKLLAQRKKESXVRRQXXI 799
+R K K AEYAKLLA+R KE+ +RQ I
Sbjct: 197 QRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
>J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 188 bits (459), Expect = 2e-47
Identities = 96/120 (80%), Positives = 105/120 (87%)
Frame = +3
Query: 300 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 479
VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 67 VLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTD 126
Query: 480 GNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 659
VPRRLGPKRAS+IRKLFNLSKEDDVR VV++ L KEGK +PR KAPKIQRLVTP
Sbjct: 127 TTVPRRLGPKRASRIRKLFNLSKEDDVRECVVRKPL-NKEGK---RPRTKAPKIQRLVTP 182
Score = 109 bits (262), Expect = 1e-23
Identities = 48/66 (72%), Positives = 53/66 (80%)
Frame = +2
Query: 101 MXLNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWKGYVLRVAGGNDKQG 280
M LN+S+PATGCQ L EV D KLR FYEKRM EV AD LG EWKGYV+R++GGNDK G
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKXG 60
Query: 281 FPMKQG 298
FPMKQG
Sbjct: 61 FPMKQG 66
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 704 KRLAKRKSSXAEYAKLLAQRKKESXVRRQXXI 799
+R K K AEYAKLLA+R K++ +RQ I
Sbjct: 197 QRTKKNKEEAAEYAKLLAKRMKQAKEKRQEQI 228
>AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein.
Length = 79
Score = 131 bits (317), Expect = 3e-30
Identities = 61/73 (83%), Positives = 67/73 (91%)
Frame = +3
Query: 318 VRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRR 497
+RLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD VPRR
Sbjct: 2 IRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRR 61
Query: 498 LGPKRASKIRKLF 536
LGPK AS+IRKLF
Sbjct: 62 LGPKEASRIRKLF 74
>BC052613-1|AAH52613.1| 99|Homo sapiens LOC728131 protein protein.
Length = 99
Score = 83.0 bits (196), Expect = 1e-15
Identities = 37/61 (60%), Positives = 44/61 (72%)
Frame = +2
Query: 101 MXLNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWKGYVLRVAGGNDKQG 280
M LN S+ A GCQ L +V D KLR FYEK M E+ A LG EWKGYV+R++GGN+KQG
Sbjct: 1 MKLNSSFLAIGCQKLIKVEDERKLRTFYEKHMATEIAAYALGEEWKGYVVRISGGNNKQG 60
Query: 281 F 283
F
Sbjct: 61 F 61
>AL391834-7|CAM21144.1| 91|Homo sapiens ribosomal protein S6
protein.
Length = 91
Score = 71.3 bits (167), Expect = 4e-12
Identities = 32/46 (69%), Positives = 34/46 (73%)
Frame = +2
Query: 101 MXLNVSYPATGCQXLFEVVDXHKLRIFYEKRMGAEVEADQLGXEWK 238
M LN+S+PATGCQ L EV D KLR FYEKRM EV AD LG EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,263,556
Number of Sequences: 237096
Number of extensions: 2105447
Number of successful extensions: 6415
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6401
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -