Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_J19
(1016 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.007
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.085
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 0.11
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 29 0.79
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.79
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.79
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.4
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 23 1.6
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 3.2
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 5.6
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 7.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 7.4
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 9.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.5 bits (83), Expect = 0.003
Identities = 24/67 (35%), Positives = 24/67 (35%)
Frame = +1
Query: 679 SPPPPXGGXXAXPXXQNTXGGPPPQXNTFXXXXXXXXPPPPPPQKXXXAXLXFFXXXXPP 858
SPPPP PPP PPPPPP A PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAP------IMGGPPPPPPPPGVAGAG--------PP 776
Query: 859 PPPPPPP 879
PPPPPPP
Sbjct: 777 PPPPPPP 783
Score = 34.3 bits (75), Expect = 0.028
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +3
Query: 789 PPPPPPTKXXGXXPXLFXXXXTPPPPPPPPXXXXQXIXKQKXSXDPAPKKD 941
PPPPPP G P PPPPPP +P PK D
Sbjct: 762 PPPPPPPGVAGAGPP------PPPPPPPAVSAGGSRYYAPAPQAEPEPKID 806
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +2
Query: 737 GAPPHXKTPSXXXXXPXXPPPPPHKKXRXXSXSFXXXKXPPPPP 868
G PP P P PPPPP S + P P
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.007
Identities = 20/63 (31%), Positives = 23/63 (36%)
Frame = +1
Query: 685 PPPXGGXXAXPXXQNTXGGPPPQXNTFXXXXXXXXPPPPPPQKXXXAXLXFFXXXXPPPP 864
PPP G + P N+ P + PP PPP A PPPP
Sbjct: 257 PPPSNGTVSSPP--NSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPP 314
Query: 865 PPP 873
PPP
Sbjct: 315 PPP 317
Score = 35.9 bits (79), Expect = 0.009
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 783 PXPPPPPPTKXXGXXPXLFXXXXTPPPPPP 872
P PPPPP + G P PPPPPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 35.5 bits (78), Expect = 0.012
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = +1
Query: 682 PPPPXGGXXAXPXXQNTXGGPPPQXNTFXXXXXXXXPPPPPPQKXXXAXLXFFXXXXPPP 861
PPPP P G PP N PPPPPP+ + P
Sbjct: 311 PPPP-------PPPSRRNRGKPPIGN--GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAP 361
Query: 862 PPPPP 876
PPPPP
Sbjct: 362 PPPPP 366
Score = 35.1 bits (77), Expect = 0.016
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 783 PXPPPPPPTKXXGXXPXLFXXXXTPPPPPPPP 878
P PPPPP + G P + PPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 32.7 bits (71), Expect = 0.085
Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +2
Query: 674 LFPPXPPXXXXXRXXXXKTXXGAPPHXKTP--SXXXXXPXXPPPPPHKKXRXXSXSFXXX 847
L P PP + +PP P PP P R + +
Sbjct: 248 LSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAAN 307
Query: 848 KXPPPPPPPP 877
K PPPPPPP
Sbjct: 308 KKRPPPPPPP 317
Score = 31.1 bits (67), Expect = 0.26
Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Frame = +1
Query: 679 SPPPPXGGXXAXPXXQNTXGGPPPQXNT-----FXXXXXXXXPPPPPPQKXXXAX--LXF 837
SPP P P +T P P ++ PPPPPP + +
Sbjct: 270 SPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGN 329
Query: 838 FXXXXPPPPPPPPP 879
PPPPPPP
Sbjct: 330 GSSNSSLPPPPPPP 343
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/66 (25%), Positives = 19/66 (28%)
Frame = +2
Query: 680 PPXPPXXXXXRXXXXKTXXGAPPHXKTPSXXXXXPXXPPPPPHKKXRXXSXSFXXXKXPP 859
PP PP R AP P PP P + S +
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 860 PPPPPP 877
PP PPP
Sbjct: 290 PPLPPP 295
Score = 26.6 bits (56), Expect = 5.6
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = +3
Query: 783 PXPPPPPPTKXXG-XXPXLFXXXXTPPPPPPPP 878
P PPPP G P L PP PPP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 783 PXPPPPPPTKXXGXXPXLFXXXXTPPPPPPPP 878
P PPP P + P L T PP P P
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.7 bits (71), Expect = 0.085
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 789 PPPPPPTKXXGXXPXLFXXXXTPPPPPPP 875
PPPPPP P F PPPPPPP
Sbjct: 9 PPPPPP-------PPGFEPPSQPPPPPPP 30
Score = 31.9 bits (69), Expect = 0.15
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +3
Query: 783 PXPPPPPPTKXXGXXPXLFXXXXTPPPPPPPP 878
P PPPPPP G P + PPPPPPP
Sbjct: 9 PPPPPPPP----GFEPP------SQPPPPPPP 30
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +1
Query: 790 PPPPPPQKXXXAXLXFFXXXXPPPPPPPPPXXXXKX*XNK 909
PPPPPP P PPPPPP K NK
Sbjct: 9 PPPPPPPPGFEP---------PSQPPPPPPPGYVKKRKNK 39
Score = 26.6 bits (56), Expect = 5.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 854 PPPPPPPP 877
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.1 bits (57), Expect(2) = 0.11
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 856 PPPPPPPPXXXXK 894
PPPPPPPP K
Sbjct: 1095 PPPPPPPPAEVEK 1107
Score = 26.6 bits (56), Expect = 5.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 853 PPPPPPPP 876
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 23.8 bits (49), Expect(2) = 0.11
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +1
Query: 679 SPPPPXGGXXAXPXXQNTXGGPPPQXNTFXXXXXXXXPPPPPP 807
S P P A N P N PPPPPP
Sbjct: 1060 SKPAPSTVTSAASSPSNISKPSAPVANNVSKPSAVPPPPPPPP 1102
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 29.5 bits (63), Expect = 0.79
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1
Query: 853 PPPPPPPPP 879
PPPPPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.79
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1
Query: 853 PPPPPPPPP 879
PPPPPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 789 PPPPPPTKXXGXXPXLFXXXXTPPPPPPPPXXXXQ 893
PP P L PPPPPPPP Q
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQ 202
Score = 26.2 bits (55), Expect = 7.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 853 PPPPPPPPP 879
P PPPPPPP
Sbjct: 236 PAPPPPPPP 244
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 685 PPPXGGXXAXPXXQNTXGGPPPQXNTFXXXXXXXXPPPP 801
PPP P NT P P N PPPP
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPP 276
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.5 bits (63), Expect = 0.79
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1
Query: 853 PPPPPPPPP 879
PPPPPPPPP
Sbjct: 945 PPPPPPPPP 953
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 789 PPPPPPTKXXGXXPXLFXXXXTPPPPPPPP 878
P PPPP P PP PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 3/33 (9%)
Frame = +3
Query: 789 PPPPPPTKXXGXXPXLFXXXXTPPPP---PPPP 878
P PP + P PPPP PPPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = +1
Query: 790 PPPPPPQKXXXAXLXFFXXXXPPPPP---PPPP 879
P PP + A PPPPP PPPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
Score = 25.8 bits (54), Expect = 9.8
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +3
Query: 783 PXPPPPPPT-KXXGXXPXLFXXXXTPPPPPPP 875
P PPPPP + P + + PPPP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 23.4 bits (48), Expect(2) = 1.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 853 PPPPPPPP 876
P PPPPPP
Sbjct: 3 PAPPPPPP 10
Score = 23.4 bits (48), Expect(2) = 1.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 856 PPPPPPPP 879
PPPPPP P
Sbjct: 5 PPPPPPAP 12
Score = 23.0 bits (47), Expect(2) = 9.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 853 PPPPPPPPP 879
PPPPP P P
Sbjct: 6 PPPPPAPAP 14
Score = 21.0 bits (42), Expect(2) = 9.8
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 790 PPPPPP 807
PPPPPP
Sbjct: 5 PPPPPP 10
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.1 bits (57), Expect = 4.2
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3
Query: 852 TPPPPPPPP 878
+PPPPPPPP
Sbjct: 369 SPPPPPPPP 377
Score = 26.6 bits (56), Expect = 5.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 856 PPPPPPPP 879
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 23.4 bits (48), Expect(2) = 3.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 783 PXPPPPPP 806
P PPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 22.2 bits (45), Expect(2) = 3.2
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 789 PPPPPPTKXXGXXP 830
PPPPPP + P
Sbjct: 371 PPPPPPPELLNHSP 384
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 26.6 bits (56), Expect = 5.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 834 LFXXXXTPPPPPPPP 878
+F TPPPPPP P
Sbjct: 233 IFSSSSTPPPPPPRP 247
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +3
Query: 792 PPPPPTKXXGXXPXLFXXXXTPPP---PPPPP 878
P PPPT+ P F PP PP PP
Sbjct: 49 PLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPP 80
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 7.4
Identities = 16/56 (28%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = +3
Query: 783 PXPPP---PPPTKXXGXXPXLFXXXXTPPPPPPPPXXXXQXIXKQKXSXDPAPKKD 941
P PPP PP K P + PP P P + K PAP +
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSE 1245
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 789 PPPPPPTKXXGXXPXLFXXXXTPPPPPPP 875
PPPPPP P PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,104,332
Number of Sequences: 5004
Number of extensions: 41299
Number of successful extensions: 543
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 529254290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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