Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_J18
(909 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 44 2e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.005
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.011
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.074
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.30
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.69
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.91
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 1.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.2
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.7
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 6.4
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 44.4 bits (100), Expect = 2e-05
Identities = 34/110 (30%), Positives = 35/110 (31%)
Frame = +3
Query: 513 APXPXPAEKXXXPXSGXGXAGPXXPXGGXGLPPXTGXLXGXXPXXRPPXXXPPXXXXXGG 692
A P PA P A P P G+PP G P PP PP G
Sbjct: 1148 AAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP-PPSEAPPVPKPSVG 1206
Query: 693 GWXPPXXPPPXXXPXPPRXXXPGGGXXPPXPXXXPXXPXPPXXPPXGRXP 842
PP PP P P P G PP P P PP P P
Sbjct: 1207 --VPPVPPPSTAPPVP----TPSAG-LPPVP--VPTAKAPPVPAPSSEAP 1247
Score = 39.5 bits (88), Expect = 6e-04
Identities = 32/107 (29%), Positives = 33/107 (30%), Gaps = 5/107 (4%)
Frame = +2
Query: 584 PXGGXXXPPXNGXPX-GXXSXGPPPXXXPXXXXGPGGGVXPPXXPPPXXXPXX--PPXXX 754
P G P +G P S PP P P V P PP P PP
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPP---VPAPSGAPPVPKPSVAAPPVPV 1135
Query: 755 PXGGXPXPXP-XXXPRXPXPPXXPPXGXPP-XXXPXPXXXXXXPXXP 889
P G P P P P P P PP P P P P P
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 37.9 bits (84), Expect = 0.002
Identities = 29/93 (31%), Positives = 29/93 (31%), Gaps = 3/93 (3%)
Frame = +2
Query: 584 PXGGXXXP-PXNGXPXGXXSXGPPPXXXPXXXXGPGGGVXPPXXPPPXXXPXX--PPXXX 754
P G P P P G PP P P V P PP P PP
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP---VPAPSGAPPVPKPSVAAPPVPA 1173
Query: 755 PXGGXPXPXPXXXPRXPXPPXXPPXGXPPXXXP 853
P G P P P PP PP PP P
Sbjct: 1174 PSSGIP---PVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 37.5 bits (83), Expect = 0.003
Identities = 26/98 (26%), Positives = 27/98 (27%), Gaps = 3/98 (3%)
Frame = +2
Query: 605 PPXNGXPXGXXSXGPPPXXXPXXXXGPGGGVXPPXXPPPXXXPXX--PPXXXPXGGXPXP 778
P + P S PP P P PPP P P P G P P
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Query: 779 XPXXXPRXPXPP-XXPPXGXPPXXXPXPXXXXXXPXXP 889
P P P P PP P P P P
Sbjct: 1087 APSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 37.1 bits (82), Expect = 0.003
Identities = 32/128 (25%), Positives = 33/128 (25%), Gaps = 3/128 (2%)
Frame = +2
Query: 515 PPSXPGGKXXXPRXXGXXGGXLXPXGGXXXP-PXNGXPXGXXSXGPPPXXXPXXXXGPGG 691
P P G P+ P G P P P G PP P P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Query: 692 GVXPPXXPPPXXXPXXPPXXXPXGGXPXPXP-XXXPRXPXPPXXPPXGXP-PXXXPXPXX 865
P P PP P P P P P P P PP P P P
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Query: 866 XXXXPXXP 889
P P
Sbjct: 1233 TAKAPPVP 1240
Score = 34.7 bits (76), Expect = 0.018
Identities = 28/98 (28%), Positives = 29/98 (29%), Gaps = 3/98 (3%)
Frame = +2
Query: 605 PPXNGXPXGXXSXGPPPXXXPXXXXGPGGGVXPPXXPPPXXXPXX-PPXXXPX-GGXPXP 778
P +G P G PP P P P PP P PP P P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVP--KPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Query: 779 XPXXXPRXPXPP-XXPPXGXPPXXXPXPXXXXXXPXXP 889
P P P P PP P P P P P
Sbjct: 1135 VPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 33.9 bits (74), Expect = 0.032
Identities = 29/118 (24%), Positives = 31/118 (26%), Gaps = 5/118 (4%)
Frame = +3
Query: 516 PXPXPAEKXXXPXSGXGXAGPXXPXGGXGLPPXTGXLXGXXPXXRPPXXXPPXXXXXGGG 695
P P P+ P P G PP P P PP G
Sbjct: 1033 PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG-- 1090
Query: 696 WXPPXXPPPXXXPXPPRXXX-----PGGGXXPPXPXXXPXXPXPPXXPPXGRXPXXPP 854
PP P P P+ P PP P P PP P G P P
Sbjct: 1091 -IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPK--PSVAAPPVPVPSGAPPVPKP 1145
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 713 PPPXXXPXXPPXXXPXGGXPXPXPXXXPRXPXPPXXPPXGXPPXXXP 853
P P PP P P P P P P P PP P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 26.2 bits (55), Expect = 6.4
Identities = 22/102 (21%), Positives = 24/102 (23%), Gaps = 3/102 (2%)
Frame = +2
Query: 605 PPXNGXPXGXXSXGPPPXXXPXXXXGPGGGVXPPXXPPPXXXPXXPPXXXPXGGXPXPXP 784
PP P + P P P + P P P P P
Sbjct: 966 PPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVP 1025
Query: 785 XXX---PRXPXPPXXPPXGXPPXXXPXPXXXXXXPXXPXXPP 901
P P P PP P P P P P P
Sbjct: 1026 LPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.005
Identities = 26/74 (35%), Positives = 26/74 (35%), Gaps = 5/74 (6%)
Frame = +3
Query: 648 RPPXXXPPXXXXXG-----GGWXPPXXPPPXXXPXPPRXXXPGGGXXPPXPXXXPXXPXP 812
RPP PP G G PPP P PPR G PP P P P
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPPP---PPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Query: 813 PXXPPXGRXPXXPP 854
P GR P PP
Sbjct: 367 RSAPSTGRQP--PP 378
Score = 36.7 bits (81), Expect = 0.005
Identities = 38/147 (25%), Positives = 38/147 (25%), Gaps = 6/147 (4%)
Frame = +2
Query: 479 PXRGXGGXXFXGPPSXPGGKXXXPRXXGXXGGXLXPXGGXXXPPXNGXPXGXXSXGPPPX 658
P G G PP P PR L P G PP PPP
Sbjct: 325 PPIGNGSSNSSLPPPPP-----PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPL 379
Query: 659 XXPXXXXGPGGGVXPPXXPPPXXXPXXPPXXXPXGG------XPXPXPXXXPRXPXPPXX 820
V P PPP P P G P P P P PP
Sbjct: 380 -------SSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLP-PSAPPSL 431
Query: 821 PPXGXPPXXXPXPXXXXXXPXXPXXPP 901
PP P P P P PP
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 32.3 bits (70), Expect = 0.098
Identities = 27/111 (24%), Positives = 28/111 (25%), Gaps = 5/111 (4%)
Frame = +2
Query: 584 PXGGXXXPPXNGXPXGXXSXGPPPXXX-----PXXXXGPGGGVXPPXXPPPXXXPXXPPX 748
P G PP + PPP G P P P P P
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Query: 749 XXPXGGXPXPXPXXXPRXPXPPXXPPXGXPPXXXPXPXXXXXXPXXPXXPP 901
P P P P P P P PP P P P PP
Sbjct: 430 SLPPSA-PPSLPMGAPAAPPLPPSAPIA-PPLPAGMPAAPPLPPAAPAPPP 478
Score = 29.1 bits (62), Expect = 0.91
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 3/82 (3%)
Frame = +2
Query: 623 PXGXXSX-GPPPXXXPXXXXGPGGGVXPPXXPP--PXXXPXXPPXXXPXGGXPXPXPXXX 793
P G S PP P PP PP P P PP P P P
Sbjct: 405 PLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP-PSAPIAPPLPAGM 463
Query: 794 PRXPXPPXXPPXGXPPXXXPXP 859
P P PP P P P
Sbjct: 464 PAAPP---LPPAAPAPPPAPAP 482
Score = 29.1 bits (62), Expect = 0.91
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 705 PXXPPPXXXPXPPRXXXPGGGXXPPXPXXXPXXPXPPXXPPXGRXPXXPP 854
P PP P P G PP P P P P P P PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAA--PPLPP 471
Score = 27.9 bits (59), Expect = 2.1
Identities = 31/138 (22%), Positives = 33/138 (23%), Gaps = 10/138 (7%)
Frame = +1
Query: 514 PPXPPRRKXGXPPXXGXGGRXPXPPGGEXXSPPKRAAXRAXFL-----XXAPPXGPXPXX 678
PP P RR G PP PP PP+ A + L PP P
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPP---PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 679 XXXXXXXXXXXXXXXXXXPXPPXXXXXGGAXXPPP-----XXXXPXXXAPPXXPXXXAXX 843
P PP A PP P PP P
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPS 430
Query: 844 XXPXXXXXXPXXXXPXPP 897
P P PP
Sbjct: 431 LPPSAPPSLPMGAPAAPP 448
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +2
Query: 701 PPXXPPPXXXPXXPPXXXPXGGXPXPXPXXXPRXPXPPXXPPXGXPPXXXPXP 859
PP P P PP P G P PR P P P P
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLP 293
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -3
Query: 631 PXRXPVXGGXPXPPXGXXGPAXPXPXS 551
P R G P PP G P P P S
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Score = 26.2 bits (55), Expect = 6.4
Identities = 19/73 (26%), Positives = 19/73 (26%), Gaps = 2/73 (2%)
Frame = +3
Query: 639 PXXRPPXXXP--PXXXXXGGGWXPPXXPPPXXXPXPPRXXXPGGGXXPPXPXXXPXXPXP 812
P PP P P G PP P P P P PP P P P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGM-PAAPPLPPAAPAPPPAPAP 482
Query: 813 PXXPPXGRXPXXP 851
P P
Sbjct: 483 APAAPVASIAELP 495
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.5 bits (78), Expect = 0.011
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +2
Query: 740 PPXXXPXGGXPXPXPXXXPRXPXPPXXPPXGXPPXXXPXPXXXXXXPXXPXXPP 901
PP P P P P P PP P G PP P P P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIP---VPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 34.7 bits (76), Expect = 0.018
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +2
Query: 701 PPXXPPPXXXPXXPPXXXPXGGXPXPXPXXXPRXPXPPXXPPXGXPPXXXPXP 859
PP PP P P P P P P P PP G PP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP-PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 714 PPPXXXPXPPRXXXPGGGXXPPXPXXXPXXPXPPXXPP 827
P P P PP GG PP P PP PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.1 bits (62), Expect = 0.91
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +2
Query: 638 SXGPPPXXXPXXXXGPGGGVXPPXXPPPXXXPXXPPXXXPXGGXPXPXPXXXP 796
S PPP P PP P P PP G P P P P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +2
Query: 647 PPPXXXPXXXXGPGGGVXPPXXPPPXXXPXXPPXXXPXGGXPXPXPXXXPRXPXPPXXPP 826
PPP P P P PPP PP P G P P P PP
Sbjct: 732 PPPP--PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP---PPPPPPPPAVS 786
Query: 827 XGXPPXXXPXP 859
G P P
Sbjct: 787 AGGSRYYAPAP 797
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 6/54 (11%)
Frame = +3
Query: 654 PXXXPPXXXXXGGGWXPPXXP------PPXXXPXPPRXXXPGGGXXPPXPXXXP 797
P PP GG PP P PP P PP G P P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 623 PXGXXSXGPPPXXXPXXXXGPGGGVXPPXXPPP 721
P GPPP P G G PP PPP
Sbjct: 753 PPAPIMGGPPPPPPPPGV--AGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 733 PXPPXXXXXGGAXXPPPXXXXPXXXAPPXXPXXXA 837
P PP GG PPP PP P A
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = -3
Query: 631 PXRXPVXGGXPXPPX--GXXGPAXPXPXSGXXXFSAG 527
P P+ GG P PP G G P P SAG
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 639 PXXRPPXXXPPXXXXXGGGWXPPXXPPPXXXPXPPRXXXPGGGXXP 776
P P PP G G PP PPP R P P
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 605 PPXNGXPXGXXSXGPPPXXXPXXXXGPGG 691
PP P G GPPP P GG
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.7 bits (71), Expect = 0.074
Identities = 29/87 (33%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
Frame = -1
Query: 900 GGXXGXXGXXXXXXGXGXXXGGXPXGGXXGGXGXRGXXXGXGXGXPPXGXXXGGXXGXXX 721
G G G G G G G GG G G G G P G GG G
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGP--GGFGGGPGGFGG 249
Query: 720 GGGXXGGXTPPPGPXXXXGXXXG-GGP 643
G G GG GP G G GGP
Sbjct: 250 GLGGFGG-----GPGGFGGGPGGHGGP 271
Score = 31.1 bits (67), Expect = 0.23
Identities = 28/87 (32%), Positives = 28/87 (32%), Gaps = 7/87 (8%)
Frame = -3
Query: 811 GXGXXGXXXGXGGXXPPPGXXXRGGXGXXXGGGXXGGXH------PPPXXXXXGGXXXG- 653
G G G G G PPPG GG G G G G H P GG G
Sbjct: 187 GGGFGGF--GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP 244
Query: 652 GRXXGXXPXRXPVXGGXPXPPXGXXGP 572
G G GG P G GP
Sbjct: 245 GGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 29.5 bits (63), Expect = 0.69
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 741 GXXGXXXGGGXXGGXTPPPGPXXXXGXXXGGGPKEXXPXGXPFXGG 604
G G GG G PPPGP G GG F GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG 229
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +2
Query: 608 PXNGXPXGXXSXGPPPXXXPXXXXGPGGGVXPPXXPP-PXXXPXXPPXXXPXGGXP-XPX 781
P + P S PP P P PP PP P P PP P P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 782 P 784
P
Sbjct: 1746 P 1746
Score = 30.3 bits (65), Expect = 0.39
Identities = 20/69 (28%), Positives = 21/69 (30%), Gaps = 2/69 (2%)
Frame = +2
Query: 689 GGVXP--PXXPPPXXXPXXPPXXXPXGGXPXPXPXXXPRXPXPPXXPPXGXPPXXXPXPX 862
GG+ P P PP P P P P P P P P PP P P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAP---PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
Query: 863 XXXXXPXXP 889
P P
Sbjct: 1736 PASSAPSVP 1744
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/71 (30%), Positives = 22/71 (30%)
Frame = +3
Query: 639 PXXRPPXXXPPXXXXXGGGWXPPXXPPPXXXPXPPRXXXPGGGXXPPXPXXXPXXPXPPX 818
P RP PP P PPP P PP PP P P P PP
Sbjct: 1690 PPVRPQSAAPPQMSA------PTPPPPPMSVPPPP--------SAPPMPAGPPSAPPPPL 1735
Query: 819 XPPXGRXPXXP 851
P P P
Sbjct: 1736 --PASSAPSVP 1744
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.69
Identities = 21/85 (24%), Positives = 22/85 (25%)
Frame = +2
Query: 647 PPPXXXPXXXXGPGGGVXPPXXPPPXXXPXXPPXXXPXGGXPXPXPXXXPRXPXPPXXPP 826
PPP P P + PPP P P P P PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPP-PPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPP 225
Query: 827 XGXPPXXXPXPXXXXXXPXXPXXPP 901
P P P P P PP
Sbjct: 226 TYTPKQADPLP--APPPPPPPTLPP 248
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 731 PXXPPXXXPXGGXPXPXPXXXPRXPXPPXXPPXGXPPXXXPXP 859
P PP P P P P P PP PP P P
Sbjct: 221 PEIPPTYTPKQADPLPAPP----PPPPPTLPPQSTNTSQLPMP 259
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.1 bits (62), Expect = 0.91
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Frame = -3
Query: 835 RPXGGX---XGGXGXXGXXXGXGGXXPPPGXXXRGGXGXXXGGGXXGGXHPPPXXXXXGG 665
+P G G G G G GG G RGG G GG GG GG
Sbjct: 126 KPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
Query: 664 XXXGGR 647
G R
Sbjct: 186 SRGGFR 191
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 4/67 (5%)
Frame = +3
Query: 666 PPXXXXXGGGWXPPXX--PPPXXXPXPPRXXXPGGGXXPPXPXXXP--XXPXPPXXPPXG 833
PP G PP P P PP PG PP P P PP G
Sbjct: 210 PPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 269
Query: 834 RXPXXPP 854
PP
Sbjct: 270 EHMPPPP 276
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 4/67 (5%)
Frame = +3
Query: 666 PPXXXXXGGGWXPPXX--PPPXXXPXPPRXXXPGGGXXPPXPXXXP--XXPXPPXXPPXG 833
PP G PP P P PP PG PP P P PP G
Sbjct: 236 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 295
Query: 834 RXPXXPP 854
PP
Sbjct: 296 EHMPPPP 302
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 4/67 (5%)
Frame = +3
Query: 666 PPXXXXXGGGWXPPXX--PPPXXXPXPPRXXXPGGGXXPPXPXXXP--XXPXPPXXPPXG 833
PP G PP P P PP PG PP P P PP G
Sbjct: 262 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 321
Query: 834 RXPXXPP 854
PP
Sbjct: 322 EHMPPPP 328
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/53 (30%), Positives = 16/53 (30%), Gaps = 2/53 (3%)
Frame = +3
Query: 702 PPXXPPPXXXPXPPRXXXPGGGXXPPXPXXXP--XXPXPPXXPPXGRXPXXPP 854
P P P PP PG PP P P PP G PP
Sbjct: 198 PAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = +3
Query: 666 PPXXXXXGGGWXPPXX--PPPXXXPXPPRXXXPGGGXXPPXPXXXPXXPXPPXXPP 827
PP G PP P P PP PG PP P PP PP
Sbjct: 288 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP--PP 341
Score = 25.8 bits (54), Expect = 8.5
Identities = 33/153 (21%), Positives = 37/153 (24%), Gaps = 4/153 (2%)
Frame = +2
Query: 455 FSVXXKXXPXRGXGGXXFXGPPSX--PGGKXXXPRXXGXXGGXLXPXGGXXXPPXNGXPX 628
F + P G PP PG P G + P P + P
Sbjct: 190 FDDEDREFPAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 249
Query: 629 GXXSXGPPPXXXPXXXXGPGGGVXPP--XXPPPXXXPXXPPXXXPXGGXPXPXPXXXPRX 802
P PG + PP P P P P P P P
Sbjct: 250 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGE 309
Query: 803 PXPPXXPPXGXPPXXXPXPXXXXXXPXXPXXPP 901
PP PP P P P PP
Sbjct: 310 HMPP--PPMHHEPGEHMPPPPMHHEPGEHMPPP 340
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/63 (28%), Positives = 18/63 (28%), Gaps = 1/63 (1%)
Frame = +2
Query: 716 PPXXXPXXPPXXXPXGGXPXPXPXXXPRXPXPPXXPPXGXPPXXXPXPXXXXXXP-XXPX 892
PP P P P P P P P P PP P P P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAP--PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Query: 893 XPP 901
PP
Sbjct: 197 MPP 199
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +2
Query: 704 PXXPPPXXXPXXPPXXXPXGGXPXPXPXXXPRXPXPPXXPPXGXPPXXXP 853
P P P P P P P P P P P PP P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 683 PGGGVXPPXXPPPXXXPXXPPXXXPXG 763
P G PP PP P PP P G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 794 PRXPXPPXXPPXGXPPXXXPXP 859
P P PP PP PP P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 6.4
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = -3
Query: 853 GGXXGXRPX--GGXXGGXGXXGXXXGXGGXXPPPGXXXRGGXGXXXGGGXXG 704
GG G R GG G G G G G G RGG GG G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,639,835
Number of Sequences: 5004
Number of extensions: 26727
Number of successful extensions: 326
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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