Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_J16
         (886 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2820|AAF55781.1|  142|Drosophila melanogaster CG5417-PA...    56   7e-08
BT001665-1|AAN71420.1|  120|Drosophila melanogaster RE48595p pro...    54   2e-07

>AE014297-2820|AAF55781.1|  142|Drosophila melanogaster CG5417-PA
           protein.
          Length = 142

 Score = 56.0 bits (129), Expect = 7e-08
 Identities = 35/105 (33%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
 Frame = +3

Query: 189 VXLXXXXFLAXXXXLFXXARXAGSXXXXXXXXXGRSXPMPRXGXPAVXXPE-YXCLLRAX 365
           V L    F+     +   A+   S         G   P+PR G P +  PE Y CL+RA 
Sbjct: 35  VLLDNSNFILRLEKIANAAKKDSSFTLTFKRYDGNDKPVPREGRPPLPKPETYMCLMRAQ 94

Query: 366 SKXXXXSXVVXXRXVXXFSTAYSNLLKXXVXGLXRLKXPKXKAXA 500
           SK    S VV    V    + YS  +K  + GL R+K  K KA A
Sbjct: 95  SKSQKISTVVRQEDVPAMMSMYSQFMKSKMDGLKRVKKVKSKAKA 139


>BT001665-1|AAN71420.1|  120|Drosophila melanogaster RE48595p
           protein.
          Length = 120

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 34/105 (32%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
 Frame = +3

Query: 189 VXLXXXXFLAXXXXLFXXARXAGSXXXXXXXXXGRSXPMPRXGXPAVXXPE-YXCLLRAX 365
           V L    F+     +   A+   S         G   P+PR G P +  PE Y CL+RA 
Sbjct: 13  VLLDNSNFILRLEKIANAAKKDSSFTLTFKRYDGNDKPVPREGRPPLPKPETYMCLMRAQ 72

Query: 366 SKXXXXSXVVXXRXVXXFSTAYSNLLKXXVXGLXRLKXPKXKAXA 500
           SK    S VV    V    + YS  +K  + GL R+K  K K  A
Sbjct: 73  SKSQKISTVVRQEDVPAMMSMYSQFMKSKMDGLKRVKKVKSKTKA 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,738,819
Number of Sequences: 53049
Number of extensions: 81227
Number of successful extensions: 63
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)