Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_J14
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1363 - 32898345-32898371,32898986-32899837,32900234-329005...    33   0.40 
01_06_1403 - 37059177-37060499,37060898-37061177,37061263-370616...    29   3.7  
12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649     29   4.9  
07_03_0059 + 12901191-12901316,12901333-12901452,12901891-129021...    29   6.5  
07_01_0275 - 2023651-2023755,2025324-2025452,2025555-2025625,202...    29   6.5  
01_05_0003 - 16841745-16841912,16842005-16842259,16842938-168430...    29   6.5  

>04_04_1363 -
           32898345-32898371,32898986-32899837,32900234-32900500,
           32900723-32901025,32902329-32902433,32903361-32903548,
           32903628-32903721
          Length = 611

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 19/68 (27%), Positives = 28/68 (41%)
 Frame = -1

Query: 211 DDTQXQXXRQDGSRAGCKXGVKKPAQHTARTKANKGRSRXGAGGXXKXKXTNTQKXXGRP 32
           +D   +  R DG  AG +   + PAQ  A   A  G +  G G   K + T  ++  G  
Sbjct: 181 EDDDPRDGRSDGDTAGSRGEEQPPAQCEAAEDALSGTAEPGGGLSWKGRSTAPEEQRGDV 240

Query: 31  ERXGXXEK 8
           E     +K
Sbjct: 241 EELAWSQK 248


>01_06_1403 -
           37059177-37060499,37060898-37061177,37061263-37061696,
           37061782-37061889
          Length = 714

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -1

Query: 211 DDTQXQXXRQDGSRAGCKXGVKKPAQHTARTKANKGRSRXGAGGXXKXKXTNTQK 47
           +D   +  R DG  AG +   + PAQ  A   A  G +  G G   K +  + +K
Sbjct: 88  EDDDPRDARSDGDTAGSRGEEQPPAQCEAAEDALSGTAEPGGGLSWKGRSVSPRK 142


>12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649
          Length = 461

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -1

Query: 454 GVMXPFVYELDSLLGEDHSKLDG 386
           GVM P + +L  LLGE+++KL G
Sbjct: 13  GVMKPLLSKLTKLLGEEYAKLKG 35


>07_03_0059 +
           12901191-12901316,12901333-12901452,12901891-12902170,
           12902348-12902895,12902943-12903122,12904331-12904846
          Length = 589

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +1

Query: 214 WCIRARSRQML*ISEGKAGXGYQGSREASDRKRQEEHHGLRLPVMDKGW 360
           W IRA +R+   I E +AG  Y+ +R  +  +R+       + + + GW
Sbjct: 409 WKIRALNRKET-IEESRAGGTYRETRSMTRNERESSSSSTPVQMYEAGW 456


>07_01_0275 -
           2023651-2023755,2025324-2025452,2025555-2025625,
           2025717-2025803,2026000-2026494,2026588-2026813
          Length = 370

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 193 AVSACRHWCIRARSRQML*ISEGKAGXGYQGSREA 297
           A  AC  WC R RS      +   A  GYQG+  A
Sbjct: 46  AACACCSWCCRRRSATQRWQNHHAAAFGYQGNTTA 80


>01_05_0003 -
           16841745-16841912,16842005-16842259,16842938-16843085,
           16843740-16843854,16844294-16844465,16844481-16844617,
           16844738-16844792
          Length = 349

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/58 (24%), Positives = 25/58 (43%)
 Frame = +1

Query: 187 GAAVSACRHWCIRARSRQML*ISEGKAGXGYQGSREASDRKRQEEHHGLRLPVMDKGW 360
           G  V  C  W      R  + I E +AG  Y+ +R  +  +R+   +   + + + GW
Sbjct: 190 GMDVEFCSIWKAIGWQRFTVTIEESRAGGTYRETRNMTRNERESSSYSTPVKMYEAGW 247


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,607,379
Number of Sequences: 37544
Number of extensions: 303599
Number of successful extensions: 775
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)