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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_J14
         (889 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537728-1|CAD97821.1|  609|Homo sapiens hypothetical protein pr...    31   5.6  
BC117287-1|AAI17288.1|  174|Homo sapiens keratin associated prot...    31   5.6  
BC110619-1|AAI10620.1|  174|Homo sapiens keratin associated prot...    31   5.6  
BC074982-1|AAH74982.1|  159|Homo sapiens keratin associated prot...    31   5.6  
BC074981-1|AAH74981.1|  159|Homo sapiens keratin associated prot...    31   5.6  
BC074919-1|AAH74919.1|  159|Homo sapiens keratin associated prot...    31   5.6  
BC074918-1|AAH74918.1|  159|Homo sapiens keratin associated prot...    31   5.6  
BC069560-1|AAH69560.1|  173|Homo sapiens KRTAP9-2 protein protein.     31   5.6  
AJ406951-1|CAC27590.1|  154|Homo sapiens keratin associated prot...    31   5.6  
AJ406950-1|CAC27589.1|  159|Homo sapiens keratin associated prot...    31   5.6  
AJ406949-1|CAC27588.1|  111|Homo sapiens keratin associated prot...    31   5.6  
AJ406947-1|CAC27586.1|  159|Homo sapiens keratin associated prot...    31   5.6  
AJ406946-1|CAC27585.1|  174|Homo sapiens keratin associated prot...    31   5.6  
AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.     31   5.6  
BC052963-1|AAH52963.1| 1394|Homo sapiens SRCAP protein protein.        30   9.8  
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat...    30   9.8  
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.             30   9.8  

>BX537728-1|CAD97821.1|  609|Homo sapiens hypothetical protein
           protein.
          Length = 609

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +1

Query: 253 SEGKAGXGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 432
           SE + G   QGSR  SD+     +  L +P        N Q  + H V SD+  +DCQ  
Sbjct: 45  SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 101

Query: 433 KQKGXS-RPQ 459
           K  G S +PQ
Sbjct: 102 KPSGASQQPQ 111


>BC117287-1|AAI17288.1|  174|Homo sapiens keratin associated protein
           9-2 protein.
          Length = 174

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 160 CTQPCCRPGGAAVSACRHWCIR 225
           C QPCCRP     + CR  C +
Sbjct: 140 CCQPCCRPACCETTCCRTTCFQ 161


>BC110619-1|AAI10620.1|  174|Homo sapiens keratin associated protein
           9-2 protein.
          Length = 174

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 160 CTQPCCRPGGAAVSACRHWCIR 225
           C QPCCRP     + CR  C +
Sbjct: 140 CCQPCCRPACCETTCCRTTCFQ 161


>BC074982-1|AAH74982.1|  159|Homo sapiens keratin associated protein
           9-8 protein.
          Length = 159

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 160 CTQPCCRPGGAAVSACRHWCIR 225
           C QPCCRP     + CR  C +
Sbjct: 125 CCQPCCRPACCETTCCRTTCFQ 146


>BC074981-1|AAH74981.1|  159|Homo sapiens keratin associated protein
           9-8 protein.
          Length = 159

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 160 CTQPCCRPGGAAVSACRHWCIR 225
           C QPCCRP     + CR  C +
Sbjct: 125 CCQPCCRPACCETTCCRTTCFQ 146


>BC074919-1|AAH74919.1|  159|Homo sapiens keratin associated protein
           9-3 protein.
          Length = 159

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 160 CTQPCCRPGGAAVSACRHWCIR 225
           C QPCCRP     + CR  C +
Sbjct: 125 CCQPCCRPACCETTCCRTTCFQ 146


>BC074918-1|AAH74918.1|  159|Homo sapiens keratin associated protein
           9-3 protein.
          Length = 159

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 160 CTQPCCRPGGAAVSACRHWCIR 225
           C QPCCRP     + CR  C +
Sbjct: 125 CCQPCCRPACCETTCCRTTCFQ 146


>BC069560-1|AAH69560.1|  173|Homo sapiens KRTAP9-2 protein protein.
          Length = 173

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 160 CTQPCCRPGGAAVSACRHWCIR 225
           C QPCCRP     + CR  C +
Sbjct: 139 CCQPCCRPACCETTCCRTTCFQ 160


>AJ406951-1|CAC27590.1|  154|Homo sapiens keratin associated protein
           9.9 protein.
          Length = 154

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 160 CTQPCCRPGGAAVSACRHWCIR 225
           C QPCCRP     + CR  C +
Sbjct: 120 CCQPCCRPACCETTCCRTTCFQ 141


>AJ406950-1|CAC27589.1|  159|Homo sapiens keratin associated protein
           9.8 protein.
          Length = 159

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 160 CTQPCCRPGGAAVSACRHWCIR 225
           C QPCCRP     + CR  C +
Sbjct: 125 CCQPCCRPACCETTCCRTTCFQ 146


>AJ406949-1|CAC27588.1|  111|Homo sapiens keratin associated protein
           9.5 protein.
          Length = 111

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 160 CTQPCCRPGGAAVSACRHWCIR 225
           C QPCCRP     + CR  C +
Sbjct: 77  CCQPCCRPACCETTCCRTTCFQ 98


>AJ406947-1|CAC27586.1|  159|Homo sapiens keratin associated protein
           9.3 protein.
          Length = 159

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 160 CTQPCCRPGGAAVSACRHWCIR 225
           C QPCCRP     + CR  C +
Sbjct: 125 CCQPCCRPACCETTCCRTTCFQ 146


>AJ406946-1|CAC27585.1|  174|Homo sapiens keratin associated protein
           9.2 protein.
          Length = 174

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 160 CTQPCCRPGGAAVSACRHWCIR 225
           C QPCCRP     + CR  C +
Sbjct: 140 CCQPCCRPACCETTCCRTTCFQ 161


>AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.
          Length = 1685

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +1

Query: 253  SEGKAGXGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 432
            SE + G   QGSR  SD+     +  L +P        N Q  + H V SD+  +DCQ  
Sbjct: 1121 SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 1177

Query: 433  KQKGXS-RPQ 459
            K  G S +PQ
Sbjct: 1178 KPSGASQQPQ 1187


>BC052963-1|AAH52963.1| 1394|Homo sapiens SRCAP protein protein.
          Length = 1394

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 480  TXKLXSVTPKTKXARKSPGSLXPXLENNRV 569
            T  + S+TPK +  R  PGSL P LE  ++
Sbjct: 1271 TPPVVSLTPKLRSTRLRPGSLVPPLETEKL 1300


>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
            SRCAP protein.
          Length = 2971

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 480  TXKLXSVTPKTKXARKSPGSLXPXLENNRV 569
            T  + S+TPK +  R  PGSL P LE  ++
Sbjct: 2848 TPPVVSLTPKLRSTRLRPGSLVPPLETEKL 2877


>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
          Length = 3053

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 480  TXKLXSVTPKTKXARKSPGSLXPXLENNRV 569
            T  + S+TPK +  R  PGSL P LE  ++
Sbjct: 2930 TPPVVSLTPKLRSTRLRPGSLVPPLETEKL 2959


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,005,114
Number of Sequences: 237096
Number of extensions: 1637017
Number of successful extensions: 3788
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3771
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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