Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_J11
(874 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 82 9e-17
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 78 1e-15
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 71 3e-13
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 70 5e-13
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 54 3e-08
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 43 7e-05
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 34 0.023
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.0
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 26 6.1
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 8.1
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 26 8.1
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 82.2 bits (194), Expect = 9e-17
Identities = 46/120 (38%), Positives = 69/120 (57%)
Frame = +1
Query: 232 LNNGIXFPALGYGXWLGLNXKXEFEITDARKLQDALSYAIDIGYRHIDTAHLYRVEPEVG 411
L NG P++G G W + K E ++A+ A+ GYRHIDTAH+Y E E+G
Sbjct: 17 LPNGDKIPSIGLGTWR--SGKDE--------TKNAVCAALKAGYRHIDTAHIYGNEKEIG 66
Query: 412 EVINKKIKDGVVKREDXFVTTKVWHHHHKQADVEVAVRDCLRRLNLEYVDLVLVXWPMSI 591
E I++ V R D +VT+K+W + H+ V +A+ L+ LNLEY+D L+ WP ++
Sbjct: 67 E----GIRESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFAL 122
Score = 39.1 bits (87), Expect = 8e-04
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +2
Query: 614 ISTTWRRGEGFEEVLKXGLXRSIGVSNFNIEQMKRLLXNXXVPXAVNQIEI 766
I TW + EE+L+ G R IG+SNFN E + R+L V ++Q+E+
Sbjct: 144 IEETW---QAMEELLETGKVRYIGISNFNNEYLDRVLKIAKVKPTIHQMEL 191
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 78.2 bits (184), Expect = 1e-15
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 15/220 (6%)
Frame = +1
Query: 232 LNNGIXFPALGYGXWLGLNXKXEFEITDARKLQDALSYAIDIGYRHIDTAHLYRVEPEVG 411
L +G P LG G W ++ + ++A+ A+ GYRHID A +Y E EVG
Sbjct: 18 LADGSKIPGLGLGTWR----------SEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVG 67
Query: 412 EVINKKIKDGVVKREDXFVTTKVWHHHHKQADVEVAVRDCLRRLNLEYVDLVLVXWPMSI 591
+ IK+ V R+D +VT+K+W + H V A+ L+ L L+Y+D L+ WP+S
Sbjct: 68 D----GIKESGVPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSF 123
Query: 592 S------QEGVDENIDY-----LETWRGV*GGPQXGTXQVHRRVQLQHRTDEEVTXQLXX 738
+ D N+ Y ETW+ + + G R + L + D + L
Sbjct: 124 KTGEDKFPKDKDGNLIYEKNPIEETWKAMEKLLETGKV---RHIGLSNFNDTNLERILKV 180
Query: 739 AXRRQPDRDXLN----LGQXELVDYCQSKGVVVVAYSPFG 846
A + +P + L Q E V+ + G+ V AYSPFG
Sbjct: 181 A-KVKPAVHQMELHPFLPQTEFVEKHKKLGIHVTAYSPFG 219
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 70.5 bits (165), Expect = 3e-13
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 4/209 (1%)
Frame = +1
Query: 241 GIXFPALGYGXWLGLNXKXEFEITDARKLQDALSYAIDIGYRHIDTAHLYRVEPEVGEVI 420
G P YG L K + EI R + D++ A+ G+ HID A +Y E EVG +
Sbjct: 7 GPKIPVPAYGVGTALFKKEKGEIN--RTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVAL 64
Query: 421 NKKIKDGVVKREDXFVTTKVWHHHHKQADVEVAVRDCLRRLNLEYVDLVLVXWPMSISQE 600
K+ V R F+T+KV H+ ++ A+ + LR+L +Y+DL L+ P+
Sbjct: 65 ----KEANVPRSKLFITSKVMHNVD---NIPEALNESLRKLGTDYLDLYLLHSPIPF--- 114
Query: 601 GVDENIDYLETWRGV*GGPQXGTXQVHRRVQLQHRTD--EEV--TXQLXXAXRRQPDRDX 768
++ I E W+ + GT VH R EE+ T + +
Sbjct: 115 -YEKKIPISEGWKAM--ETALGTGLVHSVGVSNFRIPDLEELLKTSTITPRVNQIEFHPQ 171
Query: 769 LNLGQXELVDYCQSKGVVVVAYSPFGXMV 855
+ LV++CQSKG++V Y P +V
Sbjct: 172 VYKAAKPLVEFCQSKGIIVEGYGPLSPLV 200
Score = 38.3 bits (85), Expect = 0.001
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +2
Query: 614 ISTTWRRGEGFEEVLKXGLXRSIGVSNFNIEQMKRLLXNXXVPXAVNQIE 763
IS W+ E L GL S+GVSNF I ++ LL + VNQIE
Sbjct: 121 ISEGWK---AMETALGTGLVHSVGVSNFRIPDLEELLKTSTITPRVNQIE 167
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 69.7 bits (163), Expect = 5e-13
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 7/210 (3%)
Frame = +1
Query: 232 LNNGIXFPALGYGXWLGLNXKXEFEITDARKLQDALSYAIDIGYRHIDTAHLYRVEPEVG 411
LNNG+ P YG ++ + K D++ A+ GYRHID+A +Y E + G
Sbjct: 8 LNNGLKCPQFAYGSYM----------VNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCG 57
Query: 412 EVINKKIKDGVVKREDXFVTTK---VWHHHHKQADVEVAVRDCLRRLNLEYVDLVLVXWP 582
I K +++ KRED + T+K + + + ++ +V+ C L Y+DL L+ P
Sbjct: 58 RAILKFMEETGTKREDIWFTSKLNDLSGYKSTLSSIDASVKAC----GLGYIDLFLLHSP 113
Query: 583 MSISQEGVDENIDYLETWRGV*GGPQXGTXQVHRRVQLQHRTDEEVTXQLXXAXRRQPDR 762
D +E+W+ + G + G R + + + + L + P
Sbjct: 114 YG----------DRIESWKALEKGVEEGKL---RAIGVSNFGPHHIQELLDSHPKIIPCV 160
Query: 763 DXLNL----GQXELVDYCQSKGVVVVAYSP 840
+ + L Q ++VDYC+SKG+ + AY+P
Sbjct: 161 NQIELHPFCSQQKVVDYCESKGIQLAAYAP 190
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 54.0 bits (124), Expect = 3e-08
Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 2/208 (0%)
Frame = +1
Query: 223 TXXLNNGIXFPALGYGXWLGLNXKXEFEITDARKLQDALSYAIDIGYRHIDTAHLYRVEP 402
T L NG+ P +G+G ++ + ++ A+D GYRHIDTA +Y E
Sbjct: 10 TVTLTNGMVIPRIGFGAFM----------LKYNECYGLVTQALDSGYRHIDTAAVYGNED 59
Query: 403 EVGEVINKKIKDGVVKREDXFVTTKVWHHHHKQADVEVAVRDCLRRLNLEYVDLVLVXWP 582
G+ I + VKR D F+T+K+ + A+R L L Y+DL L+ P
Sbjct: 60 ICGKAIVDWCEKNNVKRTDIFLTSKL-ANCSDYYSTRAAIRSSLHHLG-TYIDLFLIQSP 117
Query: 583 MSISQEGVDENIDYLETWRGV*GGPQXGTXQV--HRRVQLQHRTDEEVTXQLXXAXRRQP 756
+ + +W+ + G + ++H + + Q
Sbjct: 118 AGGKKSRI-------ASWKAMEEFVDSGDIRSVGVSNYGVKHLQELYASNPKFYPCVNQI 170
Query: 757 DRDXLNLGQXELVDYCQSKGVVVVAYSP 840
+ L Q ++V YCQS + + AYSP
Sbjct: 171 ELHPF-LSQDDIVKYCQSHDIAIEAYSP 197
Score = 31.5 bits (68), Expect = 0.16
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 638 EGFEEVLKXGLXRSIGVSNFNIEQMKRL-LXNXXVPXAVNQIEI 766
+ EE + G RS+GVSN+ ++ ++ L N VNQIE+
Sbjct: 129 KAMEEFVDSGDIRSVGVSNYGVKHLQELYASNPKFYPCVNQIEL 172
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 42.7 bits (96), Expect = 7e-05
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 2/167 (1%)
Frame = +1
Query: 346 AIDIGYRHIDTAHLYRVEPEVGEVINKKIKDGV-VKREDXFVTTKVWHHHHKQADVEVAV 522
A+ +G R ID+A YR E E + I V +KRED + TK+ AV
Sbjct: 33 ALSLGIRVIDSAITYRNEKECEQAIQDFCHQNVNIKREDITLITKIPDSLQGFERTWKAV 92
Query: 523 RDCLRRLNLEYVDLVLVXWPMSISQEGVDENIDYLETWRGV*GGPQXGTX-QVHRRVQLQ 699
LRR +D+VL+ P + +E+WR + + G ++
Sbjct: 93 EQSLRRTGRPKLDVVLIHSPKW--------PVRRIESWRALLQHQKEGRINKIGVSNYNI 144
Query: 700 HRTDEEVTXQLXXAXRRQPDRDXLNLGQXELVDYCQSKGVVVVAYSP 840
H +E ++ L Q + N + + YC + G++V A+SP
Sbjct: 145 HHLEEIISLGLPLPAINQVEFSAFN-NRPTFLSYCFNHGILVQAFSP 190
Score = 30.7 bits (66), Expect = 0.28
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 629 RRGEGFEEVL---KXGLXRSIGVSNFNIEQMKRLLXNXXVPXAVNQIE 763
RR E + +L K G IGVSN+NI ++ ++ A+NQ+E
Sbjct: 117 RRIESWRALLQHQKEGRINKIGVSNYNIHHLEEIISLGLPLPAINQVE 164
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 34.3 bits (75), Expect = 0.023
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 9/124 (7%)
Frame = +1
Query: 238 NGIXFPALGYGXWLGLNXKXEFEITDARKLQDALSYAIDIGYRHIDTAHLYRVEPEVGEV 417
+G+ A G WL E D ++ L A D+G DTA +Y V
Sbjct: 21 SGLKVSAFSLGGWLTYGN----EGYDVEHTKNCLKQAWDLGINTFDTAEIYS-NGNSETV 75
Query: 418 INKKIKDGVVKREDXFVTTKVWHHHH---------KQADVEVAVRDCLRRLNLEYVDLVL 570
+ K IK+ R + +TTKV+ + + + L+RL L YVD+++
Sbjct: 76 MGKAIKELGWDRSEYVITTKVFFGAGTKLPNTTGLSRKHIIEGLNASLKRLGLPYVDVIM 135
Query: 571 VXWP 582
P
Sbjct: 136 AHRP 139
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 652 LLKPLSTSPGSRYFRLPLLARSTLAXAPIPSP 557
L KP+STSP + R+P + + + P+P P
Sbjct: 996 LSKPVSTSPAAPLARVPPVPKLSSKAPPVPLP 1027
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 485 CHTFVVTKXSSRLTTPSLIFLFITSPTSGSTR*RCAVSI 369
C T +V + SSR T SL+ + S T R R AV +
Sbjct: 77 CKTSIVREISSRTFTDSLLKIASDSTTHNRVRSRIAVLV 115
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 8.1
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Frame = -3
Query: 719 TSSSVRC*SWTRRWTXSVPS*GPPQTPLHVSR*SIF---SSTPSCEIDIGQXTNTKSTYS 549
TS+S S + +PS P TPL + + SSTP ++ T+ ST
Sbjct: 265 TSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPL 324
Query: 548 RFSLLRQSRTATSTSACLWWWCHTFVVTKXSSRLTTPSLIFLFITSPTSGST 393
S TATSTS+ ++ T SS TP L + T+ TS S+
Sbjct: 325 SSVSSANSTTATSTSSTPLSSVNSTTATSASS---TP-LTSVNSTTATSASS 372
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 25.8 bits (54), Expect = 8.1
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +3
Query: 471 YKGVAPPPQASGRRGGGARLPQETESGVRGLGIGALANVDLARRGRRKYRLPG 629
Y G + GR GGG R G G GA D +GR Y G
Sbjct: 12 YNGKEDGYNSRGRYGGGYRNNYSRGGGRGGFNDGASYGYDQRGQGRNFYESDG 64
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,449,934
Number of Sequences: 5004
Number of extensions: 39970
Number of successful extensions: 135
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -