Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_J07
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81579-8|CAN86617.1| 930|Caenorhabditis elegans Hypothetical pr... 131 5e-31
Z81579-7|CAB61019.1| 927|Caenorhabditis elegans Hypothetical pr... 129 2e-30
AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein. 129 2e-30
AF077541-3|AAM54172.1| 750|Caenorhabditis elegans Alpha-catulin... 46 3e-05
AF077541-2|AAL77190.1| 759|Caenorhabditis elegans Alpha-catulin... 46 3e-05
AF077541-1|AAL77189.1| 803|Caenorhabditis elegans Alpha-catulin... 46 3e-05
Z95619-4|CAB09113.2| 397|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 30 1.9
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 29 3.2
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 29 5.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 29 5.7
AF039050-3|AAC47936.2| 498|Caenorhabditis elegans Cytochrome p4... 29 5.7
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 28 9.9
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 9.9
>Z81579-8|CAN86617.1| 930|Caenorhabditis elegans Hypothetical protein
R13H4.4b protein.
Length = 930
Score = 131 bits (317), Expect = 5e-31
Identities = 69/133 (51%), Positives = 87/133 (65%)
Frame = +1
Query: 67 EQCPESSTKQXLLAYLQRIALYCHQXQITSKVXADVQNXSGXLIVSGLDSATSLIQAAKN 246
E+ +S TK+ LLAYL +I LYC Q I SKV ADV L+VS LDSA SLIQ A+N
Sbjct: 771 EESADSQTKKDLLAYLSQITLYCQQLNICSKVKADVTQVGNELVVSALDSAMSLIQTARN 830
Query: 247 LMNAVVLTVKASYVASTKYTRQGTIASPIVVWRMKAPEKKPLIRPEKPEEVRAKVRRGSQ 426
L+ AVV TVKA+Y+ASTK+ R+ S V WRM P+K+PLIRP+K + RR S+
Sbjct: 831 LLTAVVQTVKAAYIASTKF-RRPNANSVRVEWRMAPPKKQPLIRPQKNNAIIRVCRRASE 889
Query: 427 KKQPSPIHALAEF 465
++ P LAEF
Sbjct: 890 RRPLQPAKVLAEF 902
>Z81579-7|CAB61019.1| 927|Caenorhabditis elegans Hypothetical protein
R13H4.4a protein.
Length = 927
Score = 129 bits (312), Expect = 2e-30
Identities = 69/133 (51%), Positives = 88/133 (66%)
Frame = +1
Query: 67 EQCPESSTKQXLLAYLQRIALYCHQXQITSKVXADVQNXSGXLIVSGLDSATSLIQAAKN 246
E+ +S TK+ LLAYL +I LYC Q I SKV ADV L+VS LDSA SLIQ A+N
Sbjct: 771 EESADSQTKKDLLAYLSQITLYCQQLNICSKVKADVTQVGNELVVSALDSAMSLIQTARN 830
Query: 247 LMNAVVLTVKASYVASTKYTRQGTIASPIVVWRMKAPEKKPLIRPEKPEEVRAKVRRGSQ 426
L+ AVV TVKA+Y+ASTK+ R+ S V WRM P+K+PLIRP+K + +RR S+
Sbjct: 831 LLTAVVQTVKAAYIASTKF-RRPNANSVRVEWRMAPPKKQPLIRPQKNNAI---IRRASE 886
Query: 427 KKQPSPIHALAEF 465
++ P LAEF
Sbjct: 887 RRPLQPAKVLAEF 899
>AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein.
Length = 927
Score = 129 bits (312), Expect = 2e-30
Identities = 69/133 (51%), Positives = 88/133 (66%)
Frame = +1
Query: 67 EQCPESSTKQXLLAYLQRIALYCHQXQITSKVXADVQNXSGXLIVSGLDSATSLIQAAKN 246
E+ +S TK+ LLAYL +I LYC Q I SKV ADV L+VS LDSA SLIQ A+N
Sbjct: 771 EESADSQTKKDLLAYLSQITLYCQQLNICSKVKADVTQVGNELVVSALDSAMSLIQTARN 830
Query: 247 LMNAVVLTVKASYVASTKYTRQGTIASPIVVWRMKAPEKKPLIRPEKPEEVRAKVRRGSQ 426
L+ AVV TVKA+Y+ASTK+ R+ S V WRM P+K+PLIRP+K + +RR S+
Sbjct: 831 LLTAVVQTVKAAYIASTKF-RRPNANSVRVEWRMAPPKKQPLIRPQKNNAI---IRRASE 886
Query: 427 KKQPSPIHALAEF 465
++ P LAEF
Sbjct: 887 RRPLQPAKVLAEF 899
>AF077541-3|AAM54172.1| 750|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform d protein.
Length = 750
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/78 (38%), Positives = 39/78 (50%)
Frame = +1
Query: 70 QCPESSTKQXLLAYLQRIALYCHQXQITSKVXADVQNXSGXLIVSGLDSATSLIQAAKNL 249
+ P S+ K L A L+RI L+C Q Q+ K G G S+IQ KNL
Sbjct: 626 EVPGSAEKSDLSAILERIPLHCQQLQVMVKSPT-----VGKTATFG--KVDSVIQETKNL 678
Query: 250 MNAVVLTVKASYVASTKY 303
MN + V AS+V +TKY
Sbjct: 679 MNEIAKLVTASFVCATKY 696
>AF077541-2|AAL77190.1| 759|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform b protein.
Length = 759
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/78 (38%), Positives = 39/78 (50%)
Frame = +1
Query: 70 QCPESSTKQXLLAYLQRIALYCHQXQITSKVXADVQNXSGXLIVSGLDSATSLIQAAKNL 249
+ P S+ K L A L+RI L+C Q Q+ K G G S+IQ KNL
Sbjct: 626 EVPGSAEKSDLSAILERIPLHCQQLQVMVKSPT-----VGKTATFG--KVDSVIQETKNL 678
Query: 250 MNAVVLTVKASYVASTKY 303
MN + V AS+V +TKY
Sbjct: 679 MNEIAKLVTASFVCATKY 696
>AF077541-1|AAL77189.1| 803|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform a protein.
Length = 803
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/78 (38%), Positives = 39/78 (50%)
Frame = +1
Query: 70 QCPESSTKQXLLAYLQRIALYCHQXQITSKVXADVQNXSGXLIVSGLDSATSLIQAAKNL 249
+ P S+ K L A L+RI L+C Q Q+ K G G S+IQ KNL
Sbjct: 626 EVPGSAEKSDLSAILERIPLHCQQLQVMVKSPT-----VGKTATFG--KVDSVIQETKNL 678
Query: 250 MNAVVLTVKASYVASTKY 303
MN + V AS+V +TKY
Sbjct: 679 MNEIAKLVTASFVCATKY 696
>Z95619-4|CAB09113.2| 397|Caenorhabditis elegans Hypothetical
protein H21P03.2 protein.
Length = 397
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +1
Query: 376 RPEKPEEVRAKVRRGSQKKQPSPIHALAEFQSPADSV*VQK-SIEIXIENVLK 531
R EK +++R KV RG+++K+P+ AL + A +V ++ SI +++VLK
Sbjct: 244 RVEKQKKIREKVERGAKRKEPA---ALVKVSDKARNVQSEEVSISKELQHVLK 293
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 322 ASPIVVWRMKAPEKKPLIRPEKPEE--VRAKVRRG-SQKKQPSPIHALAEFQSPADSV*V 492
A P V M+AP KK + + EKPEE + + S KK+ + + + +S D +
Sbjct: 162 AGPAPVHAMRAPAKKRVPKVEKPEEKDIDESLNAALSDKKEKKEVASDKKKESKKDEEDI 221
Query: 493 QKSIEIXIENVLKKN 537
+S+ + + KK+
Sbjct: 222 NESMNAALSDERKKS 236
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 282 VRRLHQVHPPGDHRVSDSG 338
V+R HQ+ PPG HRV G
Sbjct: 415 VQRPHQIQPPGPHRVIQQG 433
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical
protein F29D11.1 protein.
Length = 4753
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +2
Query: 50 DQXXSPNSVPNPLLNKXCSPTSNGSLCTA-TXYK*PARXRRTCRTYQE 190
+Q S N P+ C P+ +G CT + YK R RTC E
Sbjct: 294 EQQCSQNLCPSLGCQAGCHPSPHGGECTCPSGYKLDDRFHRTCSDINE 341
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL
receptor-related protein protein.
Length = 4753
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +2
Query: 50 DQXXSPNSVPNPLLNKXCSPTSNGSLCTA-TXYK*PARXRRTCRTYQE 190
+Q S N P+ C P+ +G CT + YK R RTC E
Sbjct: 294 EQQCSQNLCPSLGCQAGCHPSPHGGECTCPSGYKLDDRFHRTCSDINE 341
>AF039050-3|AAC47936.2| 498|Caenorhabditis elegans Cytochrome p450
family protein 34A6 protein.
Length = 498
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -3
Query: 455 RAWIGLGCFFWLPRRTFALTSSGFSGLMRGFFSGAFMRQ 339
R IG FWL R FALT+ G+ R G M +
Sbjct: 111 RGIIGSNGDFWLEHRRFALTTFRNFGIGRNIIEGKIMEE 149
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 343 RMKAPEKK-PLIRPEKPEEVRAKVRRGSQKKQPSPIHALAEFQSPADS 483
R AP + P++ +K E+ K ++ +KK+ +P + F+S +DS
Sbjct: 175 RKPAPARTAPIVVEKKIEKPAVKEQKARKKKEKTPTPTESSFESSSDS 222
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +1
Query: 346 MKAPEKKPLIRPEKPEEVRAKVRRGSQKKQPSPIHALAEFQSP 474
MKA KP + E P V K ++ + PSP A AE SP
Sbjct: 740 MKAVPIKPAPKTEVPPAVVKKPEPVAKSRDPSPKKAKAEPNSP 782
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,813,204
Number of Sequences: 27780
Number of extensions: 257584
Number of successful extensions: 773
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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