Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_J02
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49127-3|CAA88946.1|  523|Caenorhabditis elegans Hypothetical pr...   174   8e-44
Z49127-4|CAF31502.1|  113|Caenorhabditis elegans Hypothetical pr...    50   3e-06
U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde dehydr...    33   0.27 
AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    29   5.9  

>Z49127-3|CAA88946.1|  523|Caenorhabditis elegans Hypothetical
           protein F13D12.4a protein.
          Length = 523

 Score =  174 bits (423), Expect = 8e-44
 Identities = 90/210 (42%), Positives = 113/210 (53%)
 Frame = +3

Query: 201 APTXKLYLXGXSVASSXPXWXXLTNPATXEVIGRVPXATQXXLTSALDXXXXXXXXXXXX 380
           APT KL++ G +V S    +  LTNPAT EVI  VP ATQ  + +A+D            
Sbjct: 27  APTVKLWIDGQAVESKTTDFVELTNPATNEVIAMVPNATQAEMQAAVDSAKNAFNTWKNT 86

Query: 381 TVLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITSLQL 560
           + LTRQQ MFK   L++ +  KLA  IT EQGKT+ DAEGDV RG+Q VEH CS+ SL +
Sbjct: 87  SPLTRQQCMFKLQALIKRDMKKLAESITIEQGKTLPDAEGDVSRGLQVVEHACSVPSLMM 146

Query: 561 GDSIQNIXKDMDTHSYKVPLGSCWRCCSLQFXXXXXXXXXXXXXXXXNTCIIXPSXQDPG 740
           G+++ N+ +DMDTHSY++PLG     C   F                NT +I PS QDPG
Sbjct: 147 GETLPNVSRDMDTHSYRIPLGVTAGICPFNFPAMIPLWMFPVALATGNTMVIKPSEQDPG 206

Query: 741 AXXXXXXXXXXXXAPPGXXNXIXGXXGXVN 830
           A             P G  N I G    VN
Sbjct: 207 AAQLLVELAKEAGVPDGCVNIIHGQHSAVN 236


>Z49127-4|CAF31502.1|  113|Caenorhabditis elegans Hypothetical
           protein F13D12.4b protein.
          Length = 113

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 24/48 (50%), Positives = 31/48 (64%)
 Frame = +3

Query: 201 APTXKLYLXGXSVASSXPXWXXLTNPATXEVIGRVPXATQXXLTSALD 344
           APT KL++ G +V S    +  LTNPAT EVI  VP ATQ  + +A+D
Sbjct: 27  APTVKLWIDGQAVESKTTDFVELTNPATNEVIAMVPNATQAEMQAAVD 74


>U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde
           dehydrogenase protein 10 protein.
          Length = 506

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = +3

Query: 273 NPATXEVIGRVPXATQXXLTSALDXXXXXXXXXXXXTVLTRQQLMFKFARLLRENQSKLA 452
           NP+T +   ++P  T   +  A++            TV  R  L+ K A L+ E    +A
Sbjct: 47  NPSTGKPWIKIPDGTAREVDQAVEAAKEAFKTWKKTTVQQRSALLNKVANLIEEFNDDIA 106

Query: 453 AKITEEQGKTIADAE-GDVLRGIQS 524
              + +QGK I  A+  D+ R +Q+
Sbjct: 107 ILESRDQGKPIGLAKVMDIPRCVQN 131


>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 399 VDESKQYFCSMXYRPXWLHPRRKSXXPELPLAPCQLLHXLLGW 271
           VDE+K Y      RP    PR K   P  PL   ++L+ + GW
Sbjct: 275 VDEAKNYLLLPVERPNMQGPRTK---PRKPLQGSEVLYAVGGW 314


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,818,636
Number of Sequences: 27780
Number of extensions: 220141
Number of successful extensions: 491
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)