Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_I24
         (846 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    52   7e-09
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           52   7e-09
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        38   9e-05
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    26   0.38 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    26   0.38 

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 52.0 bits (119), Expect = 7e-09
 Identities = 39/140 (27%), Positives = 53/140 (37%), Gaps = 6/140 (4%)
 Frame = +1

Query: 193 SPXVTSASGVFLGSWXXXRRGXXFQGFRGXXXAEAPVGXLXFXAPKPXLQYSGXVXAXXX 372
           +P V +  G   G +     G  ++ + G   A  PVG   F AP+    + G + A   
Sbjct: 22  APRVKTPLGAIKGYYKISGNGKQYEAYEGIPYALPPVGKFRFKAPQKIPAWIGELSATKF 81

Query: 373 GPACPQ----PTNPNYYNXVXXXCLRLNVYTXGXSGXLR--PVVXFIHAGGFYAASXRXX 534
           G  C Q    P NP         CL LNVY        +  PV+ +IH G F   S    
Sbjct: 82  GFPCLQYTQLPVNPRDKIEGAEDCLYLNVYVPADRTPSQSLPVIFWIHGGAFQFGS--GI 139

Query: 535 XXGPDYFLXXXXVLVXXXYR 594
             G  Y +    + V   YR
Sbjct: 140 PMGAKYLMDSDVIFVTINYR 159


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 52.0 bits (119), Expect = 7e-09
 Identities = 39/140 (27%), Positives = 53/140 (37%), Gaps = 6/140 (4%)
 Frame = +1

Query: 193 SPXVTSASGVFLGSWXXXRRGXXFQGFRGXXXAEAPVGXLXFXAPKPXLQYSGXVXAXXX 372
           +P V +  G   G +     G  ++ + G   A  PVG   F AP+    + G + A   
Sbjct: 22  APRVKTPLGAIKGYYKISGNGKQYEAYEGIPYALPPVGKFRFKAPQKIPAWIGELSATKF 81

Query: 373 GPACPQ----PTNPNYYNXVXXXCLRLNVYTXGXSGXLR--PVVXFIHAGGFYAASXRXX 534
           G  C Q    P NP         CL LNVY        +  PV+ +IH G F   S    
Sbjct: 82  GFPCLQYTQLPVNPRDKIEGAEDCLYLNVYVPADRTPSQSLPVIFWIHGGAFQFGS--GI 139

Query: 535 XXGPDYFLXXXXVLVXXXYR 594
             G  Y +    + V   YR
Sbjct: 140 PMGAKYLMDSDVIFVTINYR 159


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 38.3 bits (85), Expect = 9e-05
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = +1

Query: 430 CLRLNVYTXGXSGXLRPVVXFIHAGGFYAASXRXXXXGPDYFLXXXXVLVXXXYR 594
           CL L+VYT       +PV+ ++H G F + +       PDY L    V+V   YR
Sbjct: 4   CLYLDVYTNSLDQS-KPVMFYVHEGAFISGTSSFHEMRPDYLLPKDVVVVSSNYR 57


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 271 FRGXXXAEAPVGXLXFXAPKPXLQYSGXVXAXXXGPACPQ 390
           F G   A+ P+G L F  P P   + G + A     +C Q
Sbjct: 62  FYGIPFAKPPIGPLRFRKPLPIEPWHGVLNATVLPNSCYQ 101


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 271 FRGXXXAEAPVGXLXFXAPKPXLQYSGXVXAXXXGPACPQ 390
           F G   A+ P+G L F  P P   + G + A     +C Q
Sbjct: 62  FYGIPFAKPPIGPLRFRKPLPIEPWHGVLNATVLPNSCYQ 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,544
Number of Sequences: 438
Number of extensions: 1686
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)