Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_I22
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145...   185   5e-47
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405...   184   1e-46

>03_02_0934 -
           12513810-12513834,12513918-12513970,12514212-12514525,
           12514608-12514730,12515710-12515821
          Length = 208

 Score =  185 bits (450), Expect = 5e-47
 Identities = 87/155 (56%), Positives = 104/155 (67%)
 Frame = +2

Query: 83  VPLKLQXRLAASVMRCGXKXVWLDPNXINEXANTNSRQXIRKXXKXGLVIKXPVAVHSRA 262
           V LKLQ RLAASV++CG   VWLDPN +NE +  NSRQ IRK  K G +IK P  +HSR+
Sbjct: 2   VSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSRS 61

Query: 263 RVRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXYXTAKKIDRHLYH 442
           R R+  EA++KGRH G+GK  GT  AR+P K LW             Y  AKKID+H+YH
Sbjct: 62  RARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYH 121

Query: 443 SLYMKAKGNVFXNXRVLMEYXHRKKAEKARTKMLS 547
            +YMK KGN+F N RVLME  H+ KAEKAR K LS
Sbjct: 122 DMYMKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 156


>03_05_0125 -
           21039767-21039791,21039876-21039922,21040220-21040533,
           21040613-21040735,21041599-21041710
          Length = 206

 Score =  184 bits (447), Expect = 1e-46
 Identities = 86/155 (55%), Positives = 104/155 (67%)
 Frame = +2

Query: 83  VPLKLQXRLAASVMRCGXKXVWLDPNXINEXANTNSRQXIRKXXKXGLVIKXPVAVHSRA 262
           V LKLQ RLA+SV++CG   VWLDPN +NE +  NSRQ IRK  K G +IK P  +HSR+
Sbjct: 2   VSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSRS 61

Query: 263 RVRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXYXTAKKIDRHLYH 442
           R R+  EA++KGRH G+GK  GT  AR+P K LW             Y  AKKID+H+YH
Sbjct: 62  RARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYH 121

Query: 443 SLYMKAKGNVFXNXRVLMEYXHRKKAEKARTKMLS 547
            +YMK KGN+F N RVLME  H+ KAEKAR K LS
Sbjct: 122 DMYMKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 156


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,491,518
Number of Sequences: 37544
Number of extensions: 204192
Number of successful extensions: 341
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 341
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)