Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_I18
         (858 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117394-1|AAI17395.1|  360|Homo sapiens chromosome 12 open read...    31   5.4  
BC117392-1|AAI17393.1|  360|Homo sapiens chromosome 12 open read...    31   5.4  
BC044617-1|AAH44617.1|  265|Homo sapiens C12orf42 protein protein.     31   5.4  
AK058052-1|BAB71641.1|  360|Homo sapiens protein ( Homo sapiens ...    31   5.4  

>BC117394-1|AAI17395.1|  360|Homo sapiens chromosome 12 open reading
           frame 42 protein.
          Length = 360

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +1

Query: 493 PVPSALNGASPH--QYRMVRV-TRALPXPARRDHVQTSEXLSEXCINAAIN 636
           P+P  L GAS H    R+++V + A P P RR H   S+ LS   +NA ++
Sbjct: 311 PLP-LLAGASTHFPSKRLIKVCSSAPPRPTRRFHTVCSQALSRPVVNAHLH 360


>BC117392-1|AAI17393.1|  360|Homo sapiens chromosome 12 open reading
           frame 42 protein.
          Length = 360

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +1

Query: 493 PVPSALNGASPH--QYRMVRV-TRALPXPARRDHVQTSEXLSEXCINAAIN 636
           P+P  L GAS H    R+++V + A P P RR H   S+ LS   +NA ++
Sbjct: 311 PLP-LLAGASTHFPSKRLIKVCSSAPPRPTRRFHTVCSQALSRPVVNAHLH 360


>BC044617-1|AAH44617.1|  265|Homo sapiens C12orf42 protein protein.
          Length = 265

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +1

Query: 493 PVPSALNGASPH--QYRMVRV-TRALPXPARRDHVQTSEXLSEXCINAAIN 636
           P+P  L GAS H    R+++V + A P P RR H   S+ LS   +NA ++
Sbjct: 216 PLP-LLAGASTHFPSKRLIKVCSSAPPRPTRRFHTVCSQALSRPVVNAHLH 265


>AK058052-1|BAB71641.1|  360|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25323 fis, clone TST00323. ).
          Length = 360

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +1

Query: 493 PVPSALNGASPH--QYRMVRV-TRALPXPARRDHVQTSEXLSEXCINAAIN 636
           P+P  L GAS H    R+++V + A P P RR H   S+ LS   +NA ++
Sbjct: 311 PLP-LLAGASTHFPSKRLIKVCSSAPPRPTRRFHTVCSQALSRPVVNAHLH 360


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,305,985
Number of Sequences: 237096
Number of extensions: 1215764
Number of successful extensions: 2337
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2335
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)