Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_I13
(941 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 37 0.005
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.033
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.10
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.18
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.72
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 8.8
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 36.7 bits (81), Expect = 0.005
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 472 PQKXXPXPPGGGGFXXXEKXPPPPPPXXXKKKK 374
P P PP GF + PPPPPP KK+K
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRK 37
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 677 PPPPPGXX*QKXXXPXXXGXPPPPGXXQXSRGXSP 781
PPPPPG P PPPPG + + +P
Sbjct: 12 PPPPPGFE-----PPSQPPPPPPPGYVKKRKNKTP 41
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 711 SXPPXXGGXPPPXAXXXXPXXFPPXGXXPPXPPP 812
S PP G PPP P F P PP PPP
Sbjct: 3 SLPP--GNPPPPPP----PPGFEPPSQPPPPPPP 30
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.033
Identities = 19/66 (28%), Positives = 22/66 (33%), Gaps = 8/66 (12%)
Frame = +3
Query: 678 PPPPRXXXNKXSXPPXXGGX--------PPPXAXXXXPXXFPPXGXXPPXPPPXXPXXXX 833
PPPP N+ P G PPP + PP G P PPP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 834 XKXXPP 851
+ PP
Sbjct: 373 GRQPPP 378
Score = 29.5 bits (63), Expect = 0.72
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 9/60 (15%)
Frame = +3
Query: 669 PXXPPPPRXXX-NKXSXPPXXGGXPPPXAXXXXPXXF---PPXG-----XXPPXPPPXXP 821
P PPPPR PP PPP P PP PP PPP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Frame = +2
Query: 677 PPPPPGXX*QKXXXPXXX----GXPPPPGXXQXSRGXSPRXXXPPXAPPSXPXPP 829
PPPPP P PPPP S G P A + P PP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 27.1 bits (57), Expect = 3.8
Identities = 21/90 (23%), Positives = 22/90 (24%)
Frame = +1
Query: 625 GXPTPXRGXXGGXFXXGXPPPPGXXXTKXXXPPLXGGPPPPXXXXXXPXXFPPXXXXPXX 804
G P G PP P PP PP P P P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 805 PPLXSXXXXXXNXNPRXPLXSPXGGXVGAA 894
PPL + P P P AA
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAPAPAA 486
Score = 26.6 bits (56), Expect = 5.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 451 PPGGGGFXXXEKXPPPPPP 395
PP G G PPPPPP
Sbjct: 325 PPIGNGSSNSSLPPPPPPP 343
Score = 26.6 bits (56), Expect = 5.1
Identities = 20/83 (24%), Positives = 23/83 (27%), Gaps = 2/83 (2%)
Frame = +3
Query: 669 PXXPPPPRXXXNKXSXPPXXGGXPPPXAXXXXPXXFPPXG--XXPPXPPPXXPXXXXXKX 842
P PPP + + PP P PP PP PP P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLP--MGAPA 445
Query: 843 XPPXXPXFXXXGXGGGGXXXSPP 911
PP P G +PP
Sbjct: 446 APPLPPSAPIAPPLPAGMPAAPP 468
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.10
Identities = 24/78 (30%), Positives = 24/78 (30%)
Frame = -2
Query: 910 GGXXXXPPPPXPXXXXKGXXGGXXXXXXXXGXXGGGXGGXXPXGGXXXGXLXXAXGGGXP 731
GG PPP G GG G GGG GG G G GGG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG-PGGFGGGLG 252
Query: 730 PXXGGXXFLLXXSRGGGG 677
GG G GG
Sbjct: 253 GFGGGPGGFGGGPGGHGG 270
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = +3
Query: 396 GGGGGGFFSXXXNPPP-PGG 452
GGG GGF PPP PGG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGG 206
Score = 26.2 bits (55), Expect = 6.7
Identities = 24/70 (34%), Positives = 24/70 (34%)
Frame = -3
Query: 828 GGXGXEGGAXGGXXXRGEXPRXXXXXPGGGGXPXQXGXXXFCXXXPGGGGGXXXKXXPXP 649
GG G EG GG G P PGG G PGG GG
Sbjct: 211 GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG------------GPGGFGGGLG-GFGGG 257
Query: 648 PPXXGGGPLG 619
P GGGP G
Sbjct: 258 PGGFGGGPGG 267
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -3
Query: 858 GXXGVXVXXXGGXGXEGGAXGGXXXRGEXPRXXXXXPGGGGXP 730
G G G G GG GG G P PGG G P
Sbjct: 229 GPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.18
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +2
Query: 677 PPPPPGXX*QKXXXPXXXGXPPPPGXXQXSRGXSPRXXXPPXAPPSXPXPP 829
PPP P + P G PP P P PP PS PP
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPP 1113
Score = 29.5 bits (63), Expect = 0.72
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +3
Query: 669 PXXPPPPRXXXNKXSXPPXXGGXPPPXAXXXXPXXFPPXGXXPPXPPP 812
P PPP ++ P G PP A P P PP P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Score = 29.1 bits (62), Expect = 0.95
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +3
Query: 621 PRXPHPXKGXVXGXFXPXXPPPPRXXXNKXSXPPXXGGXPPPXAXXXXPXXFPPXGXXPP 800
P P P G PP P+ PP P P P P PP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Query: 801 XPPP 812
P P
Sbjct: 1239 VPAP 1242
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/45 (28%), Positives = 14/45 (31%)
Frame = +3
Query: 678 PPPPRXXXNKXSXPPXXGGXPPPXAXXXXPXXFPPXGXXPPXPPP 812
PP P+ P G PP PP PP P P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 678 PPPPRXXXNKXSXPPXXGGXPPPXAXXXXPXXFPPXGXXPPXPPP 812
PP P P G PP P P PP PPP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/64 (25%), Positives = 17/64 (26%)
Frame = +3
Query: 621 PRXPHPXKGXVXGXFXPXXPPPPRXXXNKXSXPPXXGGXPPPXAXXXXPXXFPPXGXXPP 800
P P P PP P+ P G P P P P PP
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 801 XPPP 812
P P
Sbjct: 1181 VPKP 1184
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/63 (26%), Positives = 17/63 (26%), Gaps = 2/63 (3%)
Frame = +3
Query: 678 PPPPRXXXNKXSXPPXXGGXPPPXAXXXXPXXFPPXGXXPPXPPP--XXPXXXXXKXXPP 851
PP P P P P P P PP PPP P PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 852 XXP 860
P
Sbjct: 1210 VPP 1212
Score = 26.2 bits (55), Expect = 6.7
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +2
Query: 677 PPPPPGXX*QKXXXPXXXGXPPPPGXXQXSRGXSPRXXXPPXAPPSXPXP-PXXXTXTPX 853
P P P P G PP P + P PP PPS P P P
Sbjct: 1170 PVPAPSSGIPPVPKPAA-GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 854 XP 859
P
Sbjct: 1229 VP 1230
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 673 GXPPPPGXXXTKXXXPPLXGGPPPPXXXXXXPXXFPPXXXXPXXPP 810
G PP P PP PP P P PP P P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.5 bits (63), Expect = 0.72
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = +3
Query: 678 PPPPRXXXNKXSXPPXXGGXPPPXAXXXXPXXFPPXGXX---PPXPPPXXP 821
PPPP P PP P PP G PP PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.3
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = +3
Query: 678 PPPPRXXXNKXSXPPXXGGXPPPXAXXXXPXXFPPXGXXPPXPPPXXPXXXXXKXXPPXX 857
PPPP PP P A P P G PP PPP PP
Sbjct: 732 PPPP---------PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Query: 858 PXFXXXG 878
P G
Sbjct: 783 PAVSAGG 789
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +1
Query: 619 PQGXPTPXRGXXGGXFXXGXPPPPGXXXTKXXXPPLXGGPPP 744
P P P G PPPP PP PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 25.8 bits (54), Expect = 8.8
Identities = 20/71 (28%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Frame = +3
Query: 705 KXSXPPXXGGXPPPXAXXXXPXXFP-PXGXXPPXPPPXXPXXXXXKXXPPXXPXFXXXGX 881
K PP P A P P P PP PPP P PP P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP--PPGVAGAGPPPPPPPPPAVSA 787
Query: 882 GGGGXXXSPPR 914
GG P+
Sbjct: 788 GGSRYYAPAPQ 798
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 457 PXPPGGGGFXXXEKXPPPPPP 395
P PP G PPPPPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPP 782
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 737 PPPPGXXQXSRGXSPRXXXPPXAPPSXPXPPXXXTXTPXXP 859
PPPP S P P PPS P PP + P P
Sbjct: 1707 PPPP---PMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 8.8
Identities = 22/84 (26%), Positives = 23/84 (27%), Gaps = 1/84 (1%)
Frame = +3
Query: 669 PXXPPP-PRXXXNKXSXPPXXGGXPPPXAXXXXPXXFPPXGXXPPXPPPXXPXXXXXKXX 845
P PPP P S P PP A P PP P P P K
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP----PKVP 202
Query: 846 PPXXPXFXXXGXGGGGXXXSPPRG 917
PP +PP G
Sbjct: 203 PPPLSQAPVANTSSRPSSFAPPAG 226
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,958,659
Number of Sequences: 5004
Number of extensions: 32933
Number of successful extensions: 277
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 479324640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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