Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_I08
         (878 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061329-1|AAL28877.1|  504|Drosophila melanogaster LD25651p pro...    50   4e-06
AE014298-1556|AAF48002.2|  614|Drosophila melanogaster CG2522-PA...    50   4e-06

>AY061329-1|AAL28877.1|  504|Drosophila melanogaster LD25651p
           protein.
          Length = 504

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
 Frame = +3

Query: 180 FXXGGXVLWCFQSXXXXFSPSVXALIRXVXLQXR-SGXNXFNHNALTLQYXLXXXFELVF 356
           F  GG VLW   +    F+  + +LIR V L+ R +    +  + L +Q+ L    +LV+
Sbjct: 8   FTKGGVVLWHSNASGNSFASCINSLIRGVILEERNTEAKYYEEDHLAVQFKLDNELDLVY 67

Query: 357 VVAYXRXLQLSYVDXFLNDVXLEF 428
              + + ++L+Y+D FL D+   F
Sbjct: 68  AAIFQKVIKLNYLDGFLADMQAAF 91



 Score = 49.2 bits (112), Expect = 7e-06
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = +2

Query: 476 DFNFKTTFDKVLKXCEIWAKSQAKIPKQMRXFEDSQKSKKTVASMIE 616
           D++F   + +VL   E  +  Q K PK MR + +SQKSKKTVASMI+
Sbjct: 103 DYDFDREYRRVLSAAEEASAKQVKAPKTMRSYNESQKSKKTVASMIQ 149


>AE014298-1556|AAF48002.2|  614|Drosophila melanogaster CG2522-PA
           protein.
          Length = 614

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
 Frame = +3

Query: 180 FXXGGXVLWCFQSXXXXFSPSVXALIRXVXLQXR-SGXNXFNHNALTLQYXLXXXFELVF 356
           F  GG VLW   +    F+  + +LIR V L+ R +    +  + L +Q+ L    +LV+
Sbjct: 8   FTKGGVVLWHSNASGNSFASCINSLIRGVILEERNTEAKYYEEDHLAVQFKLDNELDLVY 67

Query: 357 VVAYXRXLQLSYVDXFLNDVXLEF 428
              + + ++L+Y+D FL D+   F
Sbjct: 68  AAIFQKVIKLNYLDGFLADMQAAF 91



 Score = 49.2 bits (112), Expect = 7e-06
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = +2

Query: 476 DFNFKTTFDKVLKXCEIWAKSQAKIPKQMRXFEDSQKSKKTVASMIE 616
           D++F   + +VL   E  +  Q K PK MR + +SQKSKKTVASMI+
Sbjct: 103 DYDFDREYRRVLSAAEEASAKQVKAPKTMRSYNESQKSKKTVASMIQ 149


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,920,320
Number of Sequences: 53049
Number of extensions: 208014
Number of successful extensions: 223
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)