Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_I03
         (853 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.88 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   1.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +1

Query: 550  LERAGD**ETGAQDQGRLRRL---REEHPGGDQED 645
            + RAG   E   +D  +L R    RE H GG QED
Sbjct: 1403 ISRAGSRDEDSTRDSTKLDRSSREREVHNGGQQED 1437


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 71  TGLQHRGGWQSL 36
           +G QH GGWQS+
Sbjct: 926 SGQQHAGGWQSI 937


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 55  LCCSPVRISSALSLSXVXXGRQVRSSLRLH 144
           L CS  R    LS+S +  GR +  S R+H
Sbjct: 630 LTCSVTRGDLPLSISWLKDGRAMGPSERVH 659


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,952
Number of Sequences: 438
Number of extensions: 1920
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)