Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_I01
         (873 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003389-4|AAN63407.1|  598|Caenorhabditis elegans Hypothetical ...    33   0.27 
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ...    33   0.27 
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U13019-4|AAC24451.1|  222|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF022985-11|AAB69967.2|  650|Caenorhabditis elegans Hypothetical...    29   5.7  
AL034488-4|CAA22449.1|  497|Caenorhabditis elegans Hypothetical ...    28   7.6  

>AF003389-4|AAN63407.1|  598|Caenorhabditis elegans Hypothetical
           protein F23H11.4b protein.
          Length = 598

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 26/107 (24%), Positives = 46/107 (42%)
 Frame = +2

Query: 194 VVADYDSAVEKSKHLYEEKKSEVITNVVNKLIETTR*TAWSTPINFGSRAPRTSSGIVSQ 373
           V ++  ++   S + YE   S V+ N +   ++T R  +  TP    S AP TS      
Sbjct: 123 VYSEPSTSSPSSTNCYENHNSSVVENPLYLSLDTYRSISGITPSP--SNAPTTSPDCDEL 180

Query: 374 XEFRLIFAENAIKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSP 514
            E+     EN      + + L  ++   + GDD RP+    ++  +P
Sbjct: 181 REWLTEEEENESCSSSRPENLNASIPAPIPGDDSRPSIDSEENPYTP 227


>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
           protein F23H11.4a protein.
          Length = 1003

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 26/107 (24%), Positives = 46/107 (42%)
 Frame = +2

Query: 194 VVADYDSAVEKSKHLYEEKKSEVITNVVNKLIETTR*TAWSTPINFGSRAPRTSSGIVSQ 373
           V ++  ++   S + YE   S V+ N +   ++T R  +  TP    S AP TS      
Sbjct: 123 VYSEPSTSSPSSTNCYENHNSSVVENPLYLSLDTYRSISGITPSP--SNAPTTSPDCDEL 180

Query: 374 XEFRLIFAENAIKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSP 514
            E+     EN      + + L  ++   + GDD RP+    ++  +P
Sbjct: 181 REWLTEEEENESCSSSRPENLNASIPAPIPGDDSRPSIDSEENPYTP 227


>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical
           protein C44H9.4 protein.
          Length = 1099

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +2

Query: 482 AYGDGKDKTSPRVSWKLIALWENNK---VYFKILNTERNQYLVLGVGTNWNGXH 634
           ++G   +   PR  ++ I+ +   +    YF++L+ E N+Y+++    N +G H
Sbjct: 129 SWGPNFNSPKPRQVFRDISTYSYERGIRAYFRVLSAEDNKYILIACHANLHGLH 182


>U13019-4|AAC24451.1|  222|Caenorhabditis elegans Hypothetical
           protein T12A2.15b protein.
          Length = 222

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 491 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 589
           D KD+ +P VS KL+AL  N +V+ K   T +N
Sbjct: 120 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 152


>U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical
           protein T12A2.15a protein.
          Length = 713

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 491 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 589
           D KD+ +P VS KL+AL  N +V+ K   T +N
Sbjct: 611 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 643


>AF022985-11|AAB69967.2|  650|Caenorhabditis elegans Hypothetical
           protein T15B7.14 protein.
          Length = 650

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = -1

Query: 765 SSTSVKALLYSRL*M*NKTSLSYLAG--CRYHWALKLSTLLTPKAIXSPFQLVPTPNTKY 592
           ++ S+    YS+L +  K++L Y+A   C  +W +   T  T K   S F L+  P   +
Sbjct: 73  TNQSLTTFEYSKLGIFRKSTLFYIAVAVCYLYWLIY--TFCTFKFSRSQFDLLIAPYRGF 130

Query: 591 WLRSVFKI 568
           +L+SV  +
Sbjct: 131 YLKSVLML 138


>AL034488-4|CAA22449.1|  497|Caenorhabditis elegans Hypothetical
           protein Y54G11A.4 protein.
          Length = 497

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = +2

Query: 623 NGXHMA---FGVNSVDSFRAQWYLQPAKYDNDVLFYIYNREYSKALTLVE 763
           NG H     F   + D +R  W L    Y +  LF+I + EY  AL + +
Sbjct: 227 NGRHKEGKEFMYKTEDDWRQGWMLAAHNYWHTALFHIESAEYEPALEIFD 276


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,208,721
Number of Sequences: 27780
Number of extensions: 337047
Number of successful extensions: 1000
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)